RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SELENOFO60613 162 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SNNO75324 88 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 VPS26AO75436 327 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CSDE1O75534 798 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 LEFTY1O75610 366 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KDM4BO94953 1096 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF202O95125 648 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CXCL14O95715 111 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 LCATP04180 440 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GLAP06280 429 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ATXN1LP0C7T5 689 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MCF2P10911 925 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 APEHP13798 732 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TGM2P21980 687 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 FBLP22087 321 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GLDCP23378 1020 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CYP3A7P24462 503 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MAT2AP31153 395 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TIA1P31483 386 aaKnown RBP eCLIP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CDAP32320 146 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 RORAP35398 523 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CHRNA4P43681 627 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MTNR1AP48039 350 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KCNJ4P48050 445 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CCT3P49368 545 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 NUMBP49757 651 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 FHITP49789 147 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GMPSP49915 693 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GDI2P50395 445 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MNAT1P51948 309 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PGDP52209 483 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 JAK3P52333 1124 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PRKAG1P54619 331 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 STX17P56962 302 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PCBP4P57723 403 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CBX1P83916 185 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 BNC1Q01954 994 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TLE3Q04726 772 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GRIN1Q05586 938 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CACNG1Q06432 222 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CDK18Q07002 472 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 RASGEF1BQ0VAM2 473 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PMPCAQ10713 525 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MERTKQ12866 999 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KLF10Q13118 480 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KRT33BQ14525 404 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 DMC1Q14565 340 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 HERC3Q15034 1050 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SLC39A14Q15043 492 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PCOLCEQ15113 449 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 STXBP2Q15833 593 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CARTPTQ16568 116 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SLC18A3Q16572 532 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SMN1Q16637 294 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 HIST2H2ACQ16777 129 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TXNRD1Q16881 649 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TATDN3Q17R31 274 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KIF19Q2TAC6 998 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TMEM119Q4V9L6 283 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM76BQ5HYJ3 339 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM47AQ5JRC9 791 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 RALGPS1Q5JS13 557 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 LRRC73Q5JTD7 316 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 Q5PR19 223 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SAPCD1Q5SSQ6 148 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TRAPPC3LQ5T215 181 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 UBAP2Q5T6F2 1119 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PRAMEF5Q5TYX0 476 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PRAMEF6Q5VXH4 476 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PLCXD3Q63HM9 321 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SEL1L3Q68CR1 1132 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SPECC1LQ69YQ0 1117 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 NAPEPLDQ6IQ20 393 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 LRRC8BQ6P9F7 803 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SLC27A1Q6PCB7 646 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 FOXR1Q6PIV2 292 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 DLEU7Q6UYE1 221 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 B3GLCTQ6Y288 498 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SCARA5Q6ZMJ2 495 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF852Q6ZMS4 543 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF704Q6ZNC4 412 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 TMEM182Q6ZP80 229 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ZBTB49Q6ZSB9 765 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CHSY3Q70JA7 882 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 EIF3MQ7L2H7 374 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 DOK3Q7L591 496 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PIGWQ7Z7B1 504 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GPR180Q86V85 440 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 WDR5BQ86VZ2 330 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CDR2LQ86X02 465 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 LRRC6Q86X45 466 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 UBQLNLQ8IYU4 475 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CEP112Q8N8E3 955 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ANKFN1Q8N957 763 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ASCC1Q8N9N2 400 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 C8orf58Q8NAV2 365 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ICA1LQ8NDH6 482 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 C7orf57Q8NEG2 295 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms