RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ELAVL3Q14576 367 aaKnown RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 GRIN2CQ14957 1233 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 ZRANB3Q5FWF4 1079 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 C6orf52Q5T4I8 152 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 REP15Q6BDI9 236 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 EGFL6Q8IUX8 553 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 OR8D1Q8WZ84 308 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 NPAS2Q99743 824 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 OLFM1Q99784 485 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 RBM38Q9H0Z9 239 aaKnown RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 BPIFA1Q9NP55 256 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 TUBA8Q9NY65 449 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 THAP10Q9P2Z0 257 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 NFKBIL1Q9UBC1 381 aaPredicted RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 SUN2Q9UH99 717 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 RSL24D1Q9UHA3 163 aaKnown RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 PCDHB1Q9Y5F3 818 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 CDH23Q9H251 3354 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 TICRRQ7Z2Z1 1910 aa11.41□□□□□ -0.58
RFFL-205ENST00000415395 TCF20Q9UGU0 1960 aaKnown RBP11.41□□□□□ -0.58
RFFL-205ENST00000415395 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 GOLGA8CPA6NN73 597 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 AGAP14A8MT82 685 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 GAPDHSO14556 408 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 MRASO14807 208 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 IPO13O94829 963 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 KAT7O95251 611 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 H6PDO95479 791 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PRAMEF1O95521 474 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ESR1P03372 595 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 LTA4HP09960 611 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 CCDC166P0CW27 439 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 BPIP17213 487 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 RPS3P23396 243 aaKnown RBP eCLIP11.4□□□□□ -0.58
RFFL-205ENST00000415395 DCDC1P59894 354 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PFKPQ01813 784 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 NFATC2Q13469 925 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 DCTN2Q13561 401 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 HTR4Q13639 388 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ARHGEF7Q14155 803 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ZNF234Q14588 700 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 INPP5AQ14642 412 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ACAP2Q15057 778 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 TMEM198Q66K66 360 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 LRRC66Q68CR7 880 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PSAPL1Q6NUJ1 521 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ZNF549Q6P9A3 640 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 IYDQ6PHW0 289 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 DSG4Q86SJ6 1040 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 LDB1Q86U70 411 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 ERI1Q8IV48 349 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 CROCCP3Q8IVE0 287 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 CHERPQ8IWX8 916 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 LILRA2Q8N149 483 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 MYLIPQ8WY64 445 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 NXNL1Q96CM4 212 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 UBXN10Q96LJ8 280 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 FAM210AQ96ND0 272 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 MUC13Q9H3R2 512 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 CACNA2D2Q9NY47 1150 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 TAS2R13Q9NYV9 303 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PKD2L2Q9NZM6 624 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 B4GALT6Q9UBX8 382 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PTBP2Q9UKA9 531 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 CRYL1Q9Y2S2 319 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 MTF2Q9Y483 593 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 PCDHGA7Q9Y5G6 932 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PLXNA2O75051 1894 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 TCRBV3S1A0A5B6 114 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PSMD11O00231 422 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 TRMUO75648 421 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 RNASEH2AO75792 299 aaKnown RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 OR6B1O95007 311 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PYGLP06737 847 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 CTSLP07711 333 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 C7P10643 843 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 HNRNPLP14866 589 aaKnown RBP eCLIP11.4□□□□□ -0.58
RFFL-205ENST00000415395 LHCGRP22888 699 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 XPAP23025 273 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 ITGB7P26010 798 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 GMPRP36959 345 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 CDKN2DP55273 166 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PTSQ03393 145 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 MESP2Q0VG99 397 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 BNIP2Q12982 314 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 LRP8Q14114 963 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PTPRRQ15256 657 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 AGKQ53H12 422 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 C9orf64Q5T6V5 341 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 SERPINA13PQ6UXR4 307 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 GK5Q6ZS86 529 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 DPPA4Q7L190 304 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 RAB44Q7Z6P3 723 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 TSPAN33Q86UF1 283 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 DHFR2Q86XF0 187 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ANKFN1Q8N957 763 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms