RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TLR8Q9NR97 1041 aaKnown RBP17.74■□□□□ 0.43
SCARB1-203ENST00000415380 TSR3Q9UJK0 312 aaKnown RBP17.74■□□□□ 0.43
SCARB1-203ENST00000415380 UTS2RQ9UKP6 389 aa17.74■□□□□ 0.43
SCARB1-203ENST00000415380 SCN10AQ9Y5Y9 1956 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 IQCF5A8MTL0 148 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 E5RI56 91 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 OR7A17O14581 309 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 KATNA1O75449 491 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 HTR1AP08908 422 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 LPOP22079 712 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 PIGAP37287 484 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 KCNQ1P51787 676 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 RELAQ04206 551 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 SFSWAPQ12872 951 aaKnown RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 ABRAXAS2Q15018 415 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 KIAA0040Q15053 153 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 ANKRD34AQ69YU3 496 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 GRAMD4Q6IC98 578 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 GOLGA7Q7Z5G4 137 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 ZNF598Q86UK7 904 aaKnown RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 OR2T12Q8NG77 320 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 MAGED4Q96JG8 741 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 RDH12Q96NR8 316 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 OSBPL10Q9BXB5 764 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 TDRD1Q9BXT4 1180 aaKnown RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 CCSER2Q9H7U1 834 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 GORASP2Q9H8Y8 452 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 NUDT4Q9NZJ9 180 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 DNAJB9Q9UBS3 223 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 UBA2Q9UBT2 640 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 C1orf232A0A0U1RR37 186 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 SOBPA7XYQ1 873 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 F5H5T6 163 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 IFRD1O00458 451 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 GSTA4O15217 222 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 SULT1C4O75897 302 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 CST1P01037 141 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 CD9P21926 228 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 JAK1P23458 1154 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-203ENST00000415380 PHEXP78562 749 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 PIGFQ07326 219 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 LAPTM5Q13571 262 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 PTPRRQ15256 657 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 C6orf141Q5SZD1 244 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 NECAB2Q7Z6G3 386 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 AADATQ8N5Z0 425 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 KCNJ9Q92806 393 aa17.73■□□□□ 0.43
SCARB1-203ENST00000415380 C16orf96A6NNT2 1141 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 CFAP99D6REC4 459 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 TBC1D4O60343 1298 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 SLC6A4P31645 630 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 RING1Q06587 406 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 CTU2Q2VPK5 515 aaKnown RBP17.72■□□□□ 0.43
SCARB1-203ENST00000415380 ZNF555Q8NEP9 628 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 FEM1AQ9BSK4 669 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 MAGEH1Q9H213 219 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 SCUBE2Q9NQ36 999 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 LIMD1Q9UGP4 676 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 ADGRE2Q9UHX3 823 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 PDE10AQ9Y233 779 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 PCDHGC4Q9Y5F7 938 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 A0A0U1RQS6 177 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 CR2P20023 1033 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 MAGEA11P43364 429 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 PPP2R2BQ00005 443 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 ZNF548Q8NEK5 533 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-203ENST00000415380 OR10A6Q8NH74 314 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 SLC47A1Q96FL8 570 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 RAD21L1Q9H4I0 556 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 SELENONQ9NZV5 590 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 SLC27A5Q9Y2P5 690 aa17.72■□□□□ 0.43
SCARB1-203ENST00000415380 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-203ENST00000415380 PFDN6O15212 129 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 GPR39O43194 453 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 OR1G1P47890 313 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 BCAP31P51572 246 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 CLCN4P51793 760 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 GTF2H2Q13888 395 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 SPCS2Q15005 226 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 PCBP2Q15366 365 aaKnown RBP eCLIP17.71■□□□□ 0.435e-8■■□□□ 11.8
SCARB1-203ENST00000415380 VARS2Q5ST30 1063 aaKnown RBP17.71■□□□□ 0.43
SCARB1-203ENST00000415380 GTF2H2CQ6P1K8 395 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 FRA10AC1Q70Z53 315 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 RBM23Q86U06 439 aaKnown RBP17.71■□□□□ 0.43
SCARB1-203ENST00000415380 PJA1Q8NG27 643 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 FKBP10Q96AY3 582 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 THUMPD3Q9BV44 507 aaKnown RBP17.71■□□□□ 0.43
SCARB1-203ENST00000415380 FUNDC2Q9BWH2 189 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 IKZF5Q9H5V7 419 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 WARS2Q9UGM6 360 aaKnown RBP17.71■□□□□ 0.43
SCARB1-203ENST00000415380 ERGIC3Q9Y282 383 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 ARIH1Q9Y4X5 557 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-203ENST00000415380 IGHA2P01877 340 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 CLCN7P51798 805 aa17.71■□□□□ 0.43
SCARB1-203ENST00000415380 AQP6Q13520 282 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms