RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CEP68Q76N32 757 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 ISCA2Q86U28 154 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CFAP206Q8IYR0 622 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 SLC22A15Q8IZD6 547 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 RGL4Q8IZJ4 473 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 ABCA7Q8IZY2 2146 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TMEM151AQ8N4L1 468 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 ARFGAP2Q8N6H7 521 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 RHEBL1Q8TAI7 183 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TCP10LQ8TDR4 215 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TSACCQ96A04 125 aaPredicted RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 SKA1Q96BD8 255 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 LINGO1Q96FE5 620 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 OR2M4Q96R27 311 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 DPEP2Q9H4A9 486 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CNOT10Q9H9A5 744 aaKnown RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CYP4F12Q9HCS2 524 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 KCNK9Q9NPC2 374 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 MRPL40Q9NQ50 206 aaKnown RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TM7SF3Q9NS93 570 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 TMEM216Q9P0N5 145 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 SUSD2Q9UGT4 822 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 PILRBQ9UKJ0 227 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 EMCNQ9ULC0 261 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 ACSL5Q9ULC5 683 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 PNMA8BQ9ULN7 279 aaPredicted RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 PRKAB1Q9Y478 270 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 A0A1B0GTW7 788 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 TARM1B6A8C7 271 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 PLIN3O60664 434 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 RASGRP1O95267 797 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 MATN4O95460 622 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 TOP3BO95985 862 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 TNFP01375 233 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 PROCP04070 461 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 GNSP15586 552 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 ETV4P43268 484 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 MAPK9P45984 424 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 GNPDA1P46926 289 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 BLKP51451 505 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 HK3P52790 923 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 PPARDQ03181 441 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 BOP1Q14137 746 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 TEAD4Q15561 434 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 N4BP2L1Q5TBK1 243 aaPredicted RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 KLC3Q6P597 504 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 LVRNQ6Q4G3 990 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 NAPRTQ6XQN6 538 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 FAM83HQ6ZRV2 1179 aaPredicted RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 ARMCX6Q7L4S7 300 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 PARGQ86W56 976 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 SPATS2Q86XZ4 545 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 VRK3Q8IV63 474 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 SPATA6LQ8N4H0 392 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 ASB11Q8WXH4 323 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 MRPL57Q9BQC6 102 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 IQCGQ9H095 443 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 ERVMER34-1Q9H9K5 563 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 CARS2Q9HA77 564 aaKnown RBP13.97□□□□□ -0.17
SF3B1-204ENST00000414963 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 GPSM3Q9Y4H4 160 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 KMT2EQ8IZD2 1858 aa13.97□□□□□ -0.17
SF3B1-204ENST00000414963 GFYI3L273 518 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SLC16A5O15375 505 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 ZBTB14O43829 449 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 CSF2P04141 144 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 DHRS4L1P0CG22 281 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 TFEBP19484 476 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SIM2Q14190 667 aaPredicted RBP13.96□□□□□ -0.17
SF3B1-204ENST00000414963 NFE2L1Q14494 772 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 TECRLQ5HYJ1 363 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 WASH2PQ6VEQ5 465 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 PIWIL4Q7Z3Z4 852 aaKnown RBP13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SYT12Q8IV01 421 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 MYO1HQ8N1T3 1032 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 FSTL5Q8N475 847 aaPredicted RBP13.96□□□□□ -0.17
SF3B1-204ENST00000414963 LILRA3Q8N6C8 439 aaPredicted RBP13.96□□□□□ -0.17
SF3B1-204ENST00000414963 FAM76AQ8TAV0 307 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 STAG3L4Q8TBR4 150 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 RDH11Q8TC12 318 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 GPBAR1Q8TDU6 330 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 PTERQ96BW5 349 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 LOXL4Q96JB6 756 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SELENOSQ9BQE4 189 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
SF3B1-204ENST00000414963 WASH6PQ9NQA3 447 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 KLC4Q9NSK0 619 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 NKIRAS1Q9NYS0 192 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 SLC17A7Q9P2U7 560 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 MOSPD1Q9UJG1 213 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
SF3B1-204ENST00000414963 PIKFYVEQ9Y2I7 2098 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms