RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 PTENP60484 403 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 LIPEQ05469 1076 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 KIAA1161Q6NSJ0 714 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 C1orf186Q6ZWK4 172 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 SDR16C5Q8N3Y7 309 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 ZNF548Q8NEK5 533 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 MCFD2Q8NI22 146 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 THEM6Q8WUY1 208 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 ASPNQ9BXN1 380 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 NDUFA13Q9P0J0 144 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 A0A0J9YYE9 177 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 CDC123O75794 336 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 CSTBP04080 98 aaKnown RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 PAEPP09466 180 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 WNT3AP56704 352 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 LRTM1Q9HBL6 345 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 DNAAF2Q9NVR5 837 aaKnown RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 C13orf42A0A1B0GVH6 325 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 M0R036 132 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 PAPSS2O95340 614 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 PDGFRLQ15198 375 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 CDKL4Q5MAI5 379 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 RBM44Q6ZP01 1051 aaKnown RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 AHSA2Q719I0 299 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 ZFRQ96KR1 1074 aaKnown RBP18.26■□□□□ 0.51
SHANK3-202ENST00000414786 FZD3Q9NPG1 666 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 SNX15Q9NRS6 342 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
SHANK3-202ENST00000414786 CLCA4Q14CN2 919 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 ARSIQ5FYB1 569 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 RNASEH2BQ5TBB1 312 aaKnown RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TCEAL3Q969E4 200 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TMEM125Q96AQ2 219 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 SPATA7Q9P0W8 599 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 A0A1W2PPL8 197 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TREHO43280 583 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 MTX2O75431 263 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 NADKO95544 446 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 IFI30P13284 250 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 MPSTP25325 297 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 ACSL1P33121 698 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 SPAM1P38567 509 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TOB1P50616 345 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 USF2Q15853 346 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 ZFP1Q6P2D0 407 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 EZH1Q92800 747 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 GPR21Q99679 349 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 A0A1W2PRU2 124 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 H0YGN5 161 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 APOC4-APOC2K7ER74 178 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 APOC2P02655 101 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 MAMLD1Q13495 774 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 LRRC32Q14392 662 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 GTF2IRD2BQ6EKJ0 949 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 GTF2IRD2Q86UP8 949 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 KBTBD8Q8NFY9 601 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 CHCHD6Q9BRQ6 235 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 RAPGEFL1Q9UHV5 662 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 DHRS12A0PJE2 317 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 PRAMEF1O95521 474 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 HCKP08631 526 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 S100A2P29034 98 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 CLCNKBP51801 687 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 GLIS3Q8NEA6 775 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 OR8H1Q8NGG4 311 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 PTCD3Q96EY7 689 aaKnown RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 WDR55Q9H6Y2 383 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 IRS2Q9Y4H2 1338 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 RENP00797 406 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 RRP1BQ14684 758 aaKnown RBP18.25■□□□□ 0.51
SHANK3-202ENST00000414786 IL22RA1Q8N6P7 574 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 OR5AK3PQ8NH89 298 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 MGME1Q9BQP7 344 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TRPV5Q9NQA5 729 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TMEM150CB9EJG8 249 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TMEM126BQ8IUX1 230 aa18.25■□□□□ 0.51
SHANK3-202ENST00000414786 TM7SF2O76062 418 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 GPM6BQ13491 265 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 THOC7Q6I9Y2 204 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 QSOX2Q6ZRP7 698 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 GRIN2DO15399 1336 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 PSMG1O95456 288 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 RPIAP49247 311 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 ID2Q02363 134 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 PDCD4Q53EL6 469 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 OLFML1Q6UWY5 402 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 SLC29A4Q7RTT9 530 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 SH3YL1Q96HL8 342 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 MRPL57Q9BQC6 102 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 TVP23BQ9NYZ1 205 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 SMIM30A4D0T7 59 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 DGKGP49619 791 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 CDK9P50750 372 aaKnown RBP18.24■□□□□ 0.51
SHANK3-202ENST00000414786 MED27Q6P2C8 311 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 OR8H3Q8N146 312 aa18.24■□□□□ 0.51
SHANK3-202ENST00000414786 MR1Q95460 341 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms