RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 XPNPEP2O43895 674 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 PRKNO60260 465 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 GPR137BO60478 399 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ERAL1O75616 437 aaKnown RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF432O94892 652 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 IGLV2-11P01706 119 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 CRYAAP02489 173 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 VPREB1P12018 145 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 PAX1P15863 534 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 NNMTP40261 264 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR2C2P49116 596 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 SNRPEP62304 92 aaKnown RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 DUOXA1Q1HG43 343 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 C9orf50Q5SZB4 431 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 C19orf48Q6RUI8 117 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ENOSF1Q7L5Y1 443 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 LDB1Q86U70 411 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 PRPF39Q86UA1 669 aaKnown RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ADIPOR2Q86V24 386 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 LONP2Q86WA8 852 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 DNAAF5Q86Y56 855 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 PTOV1Q86YD1 416 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 GUF1Q8N442 669 aaKnown RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 SYT2Q8N9I0 419 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 LMNTD1Q8N9Z9 388 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 SLC24A4Q8NFF2 622 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ERLEC1Q96DZ1 483 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF583Q96ND8 569 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 NEUROD6Q96NK8 337 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 NEK1Q96PY6 1258 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 MOV10L1Q9BXT6 1211 aaKnown RBP3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 SLA2Q9H6Q3 261 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 HHATLQ9HCP6 504 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 RPS6KA6Q9UK32 745 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 KIF27Q86VH2 1401 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 VPS8Q8N3P4 1428 aa3.6□□□□□ -1.83
HMGB1P11-201ENST00000413899 TIAM1Q13009 1591 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TEX13DA0A0J9YY54 714 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 SH2B2O14492 632 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 SSX4O60224 188 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 FGF17O60258 216 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 STARD3NLO95772 234 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ATP1A1P05023 1023 aaKnown RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR1D1P20393 614 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ANOS1P23352 680 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 RAD52P43351 418 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 IFI35P80217 286 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 BECN1Q14457 450 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 KRT33BQ14525 404 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR1D2Q14995 579 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 RBBP5Q15291 538 aaKnown RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 GCNT6Q5T4J0 391 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 GARNL3Q5VVW2 1013 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ALS2CLQ60I27 953 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ADALQ6DHV7 355 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TMED8Q6PL24 325 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 LINGO4Q6UY18 593 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 NR2C2APQ86WQ0 139 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 CEP57Q86XR8 500 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 GPALPP1Q8IXQ4 340 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 L3MBTL4Q8NA19 623 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 MCUQ8NE86 351 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TAS1R2Q8TE23 839 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TMCO6Q96DC7 493 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 OXNAD1Q96HP4 312 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZNF582Q96NG8 517 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 INPP4AQ96PE3 977 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 OR6C1Q96RD1 312 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 ZBTB20Q9HC78 741 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TRPC7Q9HCX4 862 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 MBNL1Q9NR56 388 aaKnown RBP3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 FAM118AQ9NWS6 357 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 GDE1Q9NZC3 331 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 TTLL3Q9Y4R7 772 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 NME7Q9Y5B8 376 aa3.59□□□□□ -1.83
HMGB1P11-201ENST00000413899 EFCAB5A4FU69 1503 aa3.59□□□□□ -1.84
HMGB1P11-201ENST00000413899 A8MV72 311 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 ADAM20O43506 726 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRAMEF11O60813 436 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 LIPFP07098 398 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 ADRB2P07550 413 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 UMODP07911 640 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 IL11P20809 199 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 DVL1P1P54792 670 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 MFAP5Q13361 173 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 ASPRV1Q53RT3 343 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 IGSF11Q5DX21 431 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 NDUFAF5Q5TEU4 345 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 KLC3Q6P597 504 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 TMCO3Q6UWJ1 677 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 DCUN1D3Q8IWE4 304 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 KLHDC9Q8NEP7 349 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 OR10S1Q8NGN2 331 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 WDR20Q8TBZ3 569 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 ST6GAL2Q96JF0 529 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRMT6Q96LA8 375 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 UHRF2Q96PU4 802 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 NODALQ96S42 347 aa3.58□□□□□ -1.84
HMGB1P11-201ENST00000413899 CDRT15Q96T59 188 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms