RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 KCTD19Q17RG1 926 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 GLYATQ6IB77 296 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CLNKQ7Z7G1 428 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 PGAM4Q8N0Y7 254 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 PPIEQ9UNP9 301 aaKnown RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 SIN3BO75182 1162 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 HIPK1Q86Z02 1210 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 UBR7Q8N806 425 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 NAT8LQ8N9F0 302 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 SLC9A6Q92581 669 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 DNASE1L2Q92874 299 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 ROPN1LQ96C74 230 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 PPM1MQ96MI6 270 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 SH3GL2Q99962 352 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 MRPS26Q9BYN8 205 aaKnown RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 SPRTNQ9H040 489 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 EGFL7Q9UHF1 273 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 C9IYK1 514 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 SCELO95171 688 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 TYRP14679 529 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 MASP1P48740 699 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 ENPP7Q6UWV6 458 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 HFE2Q6ZVN8 426 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 AMER2Q8N7J2 671 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF540Q8NDQ6 660 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 OR10H5Q8NGA6 315 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 RIOK2Q9BVS4 552 aaKnown RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 TOP3BO95985 862 aaKnown RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 TMED10P49755 219 aaKnown RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 RAB14P61106 215 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 UPP1Q16831 310 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 SLC9A4Q6AI14 798 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF572Q7Z3I7 529 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ST13P5Q8NFI4 369 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 CRNNQ9UBG3 495 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 TNFP01375 233 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 DPYSQ14117 519 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 PTGES3Q15185 160 aaKnown RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 C22orf39Q6P5X5 142 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 CMTM8Q8IZV2 173 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ZBED6CLQ96FA7 236 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 C5orf34Q96MH7 638 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 CCM2Q9BSQ5 444 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 SLC22A2O15244 555 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 GJA1P17302 382 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 STAT5AP42229 794 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 RGS8P57771 180 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 RING1Q06587 406 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ZIK1Q3SY52 487 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 MTX3Q5HYI7 312 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 MCEMP1Q8IX19 187 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ZC3H3Q8IXZ2 948 aaKnown RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 KBTBD8Q8NFY9 601 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 GSDMCQ9BYG8 508 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 PNPLA3Q9NST1 481 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 TMEM63AO94886 807 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 ECDO95905 644 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-202ENST00000413872 IFNW1P05000 195 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 DNAJB1P25685 340 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 SIRPB2Q5JXA9 342 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 OR13C4Q8NGS5 318 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 NMUR2Q9GZQ4 415 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 CRTAC1Q9NQ79 661 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
PHRF1-202ENST00000413872 NEMP2A6NFY4 417 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 LEFTY2O00292 366 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 CCR8P51685 355 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 CCNHP51946 323 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-202ENST00000413872 NDUFAF6Q330K2 333 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 RNF19BQ6ZMZ0 732 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 DGCR6LQ9BY27 220 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 PALMDQ9NP74 551 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 SLC2A4RGQ9NR83 387 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 PTGFRNQ9P2B2 879 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 PACSIN3Q9UKS6 424 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 CPN2P22792 545 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 C1QTNF8P60827 252 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 AAK1Q2M2I8 961 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF57Q68EA5 555 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-202ENST00000413872 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 MBOAT1Q6ZNC8 495 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 Q6ZVU0 165 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 IFNLR1Q8IU57 520 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-202ENST00000413872 FBXW2Q9UKT8 454 aa17.02■□□□□ 0.32
PHRF1-202ENST00000413872 ANKRD66B4E2M5 251 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 TMEM150CB9EJG8 249 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 G3V2T6 193 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 FFAR2O15552 330 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 TCEA3O75764 348 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 HOXB2P14652 356 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 FAM129CQ86XR2 697 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms