RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 ABHD18Q0P651 414 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 SNX1Q13596 522 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 TUBB2AQ13885 445 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 NAA25Q14CX7 972 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP54-202ENST00000413442 LRRC8EQ6NSJ5 796 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 CRTC3Q6UUV7 619 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 TMEM135Q86UB9 458 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 OOSP2Q86WS3 158 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 DTX1Q86Y01 620 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 PPIL6Q8IXY8 311 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 RAB42Q8N4Z0 105 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 BBOF1Q8ND07 529 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 OR13J1Q8NGT2 312 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 GSDMBQ8TAX9 411 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 DNAJC1Q96KC8 554 aaKnown RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 CATSPER2Q96P56 530 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 CCNL2Q96S94 520 aaPredicted RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 FAM118BQ9BPY3 351 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 APOL2Q9BQE5 337 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 TUBB2BQ9BVA1 445 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 SEMA6CQ9H3T2 930 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 PRORYQ9H606 182 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 SUDS3Q9H7L9 328 aaPredicted RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 SYNDIG1Q9H7V2 258 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 RDH14Q9HBH5 336 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 PDE7BQ9NP56 450 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 CATSPERZQ9NTU4 200 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 INTS10Q9NVR2 710 aaKnown RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 SLC39A1Q9NY26 324 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 OR6C2Q9NZP2 312 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 SLC24A2Q9UI40 661 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 ATXN7L1Q9ULK2 861 aaPredicted RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 SOX13Q9UN79 622 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 PRKAB1Q9Y478 270 aa6.25□□□□□ -1.41
USP54-202ENST00000413442 TMEM184BQ9Y519 407 aaPredicted RBP6.25□□□□□ -1.41
USP54-202ENST00000413442 TRBV23OR9-2A0A075B6M9 112 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SLC5A10A0PJK1 596 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CCDC162PA2VCL2 907 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TLCD2A6NGC4 264 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 C2orf74A8MZ97 194 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 K7ENP7 123 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 ERVH48-1M5A8F1 160 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 POLR1CO15160 346 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 KLK10O43240 276 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 BUD23O43709 281 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 SGTAO43765 313 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 MTX2O75431 263 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 GPC4O75487 556 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 NDUFS3O75489 264 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 USP1O94782 785 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SLCO2B1O94956 709 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 ZBTB11O95625 1053 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 EML2O95834 649 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 ITGB2P05107 769 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 HBQ1P09105 142 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CCNYL3P0C7X3 344 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 FGF3P11487 239 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 FGF5P12034 268 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 HOXB3P14651 431 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 NELFEP18615 380 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 OGNP20774 298 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 CD9P21926 228 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 RPL10P27635 214 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 ATP5DP30049 168 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CXCR5P32302 372 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SHMT2P34897 504 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 HSD17B2P37059 387 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CCNFP41002 786 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CAPZBP47756 277 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KCNJ1P48048 391 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 CTSCP53634 463 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 HSD11B2P80365 405 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CFHR1Q03591 330 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TLE3Q04726 772 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 GPS1Q13098 491 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 BOP1Q14137 746 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 SEPT6Q14141 434 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 DHX34Q14147 1143 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 GPR18Q14330 331 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 NFE2L1Q14494 772 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SPARCL1Q14515 664 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KCNJ11Q14654 390 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CLCA4Q14CN2 919 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 C16orf72Q14CZ0 275 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TMED2Q15363 201 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 ZNF658BQ4V348 819 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 KHDC1Q4VXA5 237 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 PLEKHS1Q5SXH7 462 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KIAA0930Q6ICG6 404 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 UGT3A1Q6NUS8 523 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 INO80CQ6PI98 192 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 UNC5DQ6UXZ4 953 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms