RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SERPINF2P08697 491 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 PRSS56P0CW18 603 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 SERPINB10P48595 397 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 HK3P52790 923 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 MRPS6P82932 125 aaKnown RBP17.37■□□□□ 0.37
SDCBP-202ENST00000413219 KIAA0040Q15053 153 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 CCDC92Q53HC0 331 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-202ENST00000413219 ENPP6Q6UWR7 440 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 PIWIL3Q7Z3Z3 882 aaKnown RBP17.37■□□□□ 0.37
SDCBP-202ENST00000413219 BTLAQ7Z6A9 289 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 SLCO6A1Q86UG4 719 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 EID3Q8N140 333 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 SCAIQ8N9R8 606 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 FBXO30Q8TB52 745 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 CD274Q9NZQ7 290 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 LIMD1Q9UGP4 676 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 TRMT6Q9UJA5 497 aaKnown RBP17.37■□□□□ 0.37
SDCBP-202ENST00000413219 GPC6Q9Y625 555 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-202ENST00000413219 DOCK4Q8N1I0 1966 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 M0QZ92 97 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 LSM1O15116 133 aaKnown RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 MUSKO15146 869 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 NOBOXO60393 691 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 CHRNA1P02708 482 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ITGAMP11215 1152 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PKMP14618 531 aaKnown RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 AGXTP21549 392 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 FUT4P22083 530 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ACVR2AP27037 513 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 CPT1AP50416 773 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 IST1P53990 364 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 IL2P60568 153 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PTPRNQ16849 979 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 DGUOKQ16854 277 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 MFSD4AQ8N468 514 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 OR7A2PQ8NGA2 310 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 FAR1Q8WVX9 515 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ZBTB18Q99592 522 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 SH3GL1Q99961 368 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 TRIT1Q9H3H1 467 aaKnown RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 NUDT4Q9NZJ9 180 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 TRIP12Q14669 1992 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PFDN6O15212 129 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 XYLBO75191 536 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 RETP07949 1114 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PIRTP0C851 137 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 IL1RNP18510 177 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 TYMPP19971 482 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 TGM1P22735 817 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 DGKQP52824 942 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 CYP4F3Q08477 520 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 BCL2A1Q16548 175 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 SMU1Q2TAY7 513 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 FBXL22Q6P050 247 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 LETMD1Q6P1Q0 360 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 SPESP1Q6UW49 350 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PLEKHH3Q7Z736 793 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ZCCHC7Q8N3Z6 543 aaKnown RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 METTL6Q8TCB7 284 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 SLC13A3Q8WWT9 602 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 IGSF8Q969P0 613 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 HEPHQ9BQS7 1158 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ATP13A3Q9H7F0 1226 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 PAK1IP1Q9NWT1 392 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-202ENST00000413219 VAPAQ9P0L0 249 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ORC6Q9Y5N6 252 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 TRPV2Q9Y5S1 764 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 GBF1Q92538 1859 aa17.36■□□□□ 0.37
SDCBP-202ENST00000413219 ELOVL7A1L3X0 281 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 DFNA5O60443 496 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 GJB3O75712 270 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 NTRK1P04629 796 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 GRK3P35626 688 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 DCTP40126 519 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 MAPKAPK2P49137 400 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PIGFQ07326 219 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PCBP2Q15366 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 NR6A1Q15406 480 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 TAF1AQ15573 450 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PLA2G4EQ3MJ16 856 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PAN2Q504Q3 1202 aaKnown RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 HABP4Q5JVS0 413 aaKnown RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 IL27RAQ6UWB1 636 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 HIPK1Q86Z02 1210 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 OR52B6Q8NGF0 335 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PHF10Q8WUB8 498 aaKnown RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 PPP3R2Q96LZ3 170 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 LTB4R2Q9NPC1 389 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 POLR3HQ9Y535 204 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 TNPO3Q9Y5L0 923 aaKnown RBP17.35■□□□□ 0.37
SDCBP-202ENST00000413219 M0R3G1 203 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 CXCR6O00574 342 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 HS6ST1O60243 411 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 CAPN1P07384 714 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 AKT1P31749 480 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 NRIP1P48552 1158 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 HTR6P50406 440 aa17.35■□□□□ 0.37
SDCBP-202ENST00000413219 EMX1Q04741 257 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms