RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 U2AF1Q01081 240 aaKnown RBP eCLIP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 LGALS3BPQ08380 585 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 GALNT2Q10471 571 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 MAD2L1Q13257 205 aaPredicted RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 OS9Q13438 667 aaPredicted RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 CAMK1Q14012 370 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 SF3A2Q15428 464 aaKnown RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 SLC35G1Q2M3R5 365 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 TTC22Q5TAA0 569 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 ABI3BPQ7Z7G0 1075 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 PTOV1Q86YD1 416 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 GPALPP1Q8IXQ4 340 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 HUS1BQ8NHY5 278 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 UTP15Q8TED0 518 aaKnown RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 RNF138Q8WVD3 245 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 C3orf49Q96BT1 292 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 ZNF486Q96H40 463 aaPredicted RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 SMC6Q96SB8 1091 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 MAP3K3Q99759 626 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 HERC2P3Q9BVR0 1158 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 B3GAT2Q9NPZ5 323 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 OLFML3Q9NRN5 406 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 CTNNAL1Q9UBT7 734 aa0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 ZFP37Q9Y6Q3 630 aaPredicted RBP0.11□□□□□ -2.39
RNU6-554P-201ENST00000410466 IGLV4-3A0A075B6K6 122 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 IGKV2D-24A0A075B6R9 120 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 IGHV4-30-2A0A087WSY4 118 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 KLF18A0A0U1RQI7 1052 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 PDXKO00764 312 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 PER2O15055 1255 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 IGHEP01854 428 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 ODC1P11926 461 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 ATP1A3P13637 1013 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 EDN2P20800 178 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 APOBEC1P41238 236 aaKnown RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 PPOXP50336 477 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 SORDQ00796 357 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 GUCY2DQ02846 1103 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 C16orf72Q14CZ0 275 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 VEPH1Q14D04 833 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 WSCD2Q2TBF2 565 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 CES4AQ5XG92 561 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 SIGIRRQ6IA17 410 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 PAPD4Q6PIY7 484 aaKnown RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 RASGRP2Q7LDG7 609 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 CACNA2D4Q7Z3S7 1137 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 ZNF589Q86UQ0 364 aaPredicted RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 FAM160B2Q86V87 743 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 CATSPERDQ86XM0 798 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 ADAMTS16Q8TE57 1224 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 APBB2Q92870 758 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 RTKNQ9BST9 563 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 RTFDC1Q9BY42 306 aaPredicted RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 IFIH1Q9BYX4 1025 aaKnown RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 SLC32A1Q9H598 525 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 PLEKHA2Q9HB19 425 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 ACSS1Q9NUB1 689 aaPredicted RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 CLEC5AQ9NY25 188 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 LSM4Q9Y4Z0 139 aaKnown RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 CEP83Q9Y592 693 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 POGZQ7Z3K3 1410 aa0.1□□□□□ -2.39
RNU6-554P-201ENST00000410466 VWA3AA6NCI4 1184 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 PABPN1LA6NDY0 278 aaKnown RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 SNAP91O60641 907 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 RFPL1O75677 317 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 GJB3O75712 270 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 MT-CYBP00156 380 aaPredicted RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 FAM200BP0CF97 657 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 HSD3B1P14060 373 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 CD1EP15812 388 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 EFNA1P20827 205 aaPredicted RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 LHCGRP22888 699 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 AXLP30530 894 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 SHMT1P34896 483 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 CASP5P51878 434 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 RPS18P62269 152 aaKnown RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 MEF2BQ02080 365 aaPredicted RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 ZNF33BQ06732 778 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 NAE1Q13564 534 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 COL28A1Q2UY09 1125 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 DCAF10Q5QP82 559 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 SERTAD4-AS1Q5TG53 156 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 CXorf57Q6NSI4 855 aaKnown RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 PQLC2Q6ZP29 291 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 GPAT4Q86UL3 456 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 RNF130Q86XS8 419 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 TMEM139Q8IV31 216 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 SMPDL3BQ92485 455 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 CNOT9Q92600 299 aaKnown RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 RNFT2Q96EX2 444 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 RSPO3Q9BXY4 272 aaPredicted RBP0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 CD207Q9UJ71 328 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 KCND3Q9UK17 655 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 FAM96BQ9Y3D0 163 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 WIPI2Q9Y4P8 454 aa0.09□□□□□ -2.4
RNU6-554P-201ENST00000410466 NID2Q14112 1375 aa0.08□□□□□ -2.4
RNU6-554P-201ENST00000410466 TEX13DA0A0J9YY54 714 aaPredicted RBP0.08□□□□□ -2.4
RNU6-554P-201ENST00000410466 A0A1W2PR80 420 aa0.08□□□□□ -2.4
RNU6-554P-201ENST00000410466 FAM90A20PA6NIJ5 464 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms