RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SLC5A10A0PJK1 596 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 IQCF5A8MTL0 148 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 JUPP14923 745 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 CD1CP29017 333 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 ALDH4A1P30038 563 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 HALP42357 657 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 TARDBPQ13148 414 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTCD3-203ENST00000409783 RPA4Q13156 261 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 CTBP1Q13363 440 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 SQSTM1Q13501 440 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 THOC5Q13769 683 aaKnown RBP21.88■■□□□ 1.09
PTCD3-203ENST00000409783 HSP90AA5PQ58FG0 334 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 RNF187Q5TA31 235 aaPredicted RBP21.88■■□□□ 1.09
PTCD3-203ENST00000409783 TMPRSS9Q7Z410 1059 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 KCNMB4Q86W47 210 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 ANKMY2Q8IV38 441 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 LMNTD2Q8IXW0 634 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 FBXO25Q8TCJ0 367 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 ELMO1Q92556 727 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 SH3KBP1Q96B97 665 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 EPB41L5Q9HCM4 733 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 SLC40A1Q9NP59 571 aa21.88■■□□□ 1.09
PTCD3-203ENST00000409783 ZC3H7BQ9UGR2 993 aaKnown RBP21.88■■□□□ 1.09
PTCD3-203ENST00000409783 UBA6A0AVT1 1052 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 ESYT3A0FGR9 886 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 LILRA5A6NI73 299 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 D6RAR5 112 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 LIN7AO14910 233 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 VIPP01282 170 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 ERVK-10P10266 1014 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 MTHFD1P11586 935 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CCR7P32248 378 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 SLC1A2P43004 574 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 PREPP48147 710 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 PLTPP55058 493 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CAV1Q03135 178 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CFHR1Q03591 330 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 BIRC2Q13490 618 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 SPIDRQ14159 915 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 NAPRTQ6XQN6 538 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 RBM44Q6ZP01 1051 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 TMEM26Q6ZUK4 368 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 KRT222Q8N1A0 295 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CEP112Q8N8E3 955 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 FBXO36Q8NEA4 188 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CXorf40BQ96DE9 158 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CFAP36Q96G28 342 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 GFM1Q96RP9 751 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 SLC38A3Q99624 504 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 TMEM121BQ9BXQ6 578 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 STN1Q9H668 368 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 INTS10Q9NVR2 710 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 KCNK4Q9NYG8 393 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 GNPTGQ9UJJ9 305 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 ATXN7L1Q9ULK2 861 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CFAP20Q9Y6A4 193 aaKnown RBP21.87■■□□□ 1.09
PTCD3-203ENST00000409783 CEP295Q9C0D2 2601 aa21.87■■□□□ 1.09
PTCD3-203ENST00000409783 KIF26BQ2KJY2 2108 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 EIF3HO15372 352 aaKnown RBP eCLIP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 SLC35G4P0C7Q5 338 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 ITGB6P18564 788 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 AOAHP28039 575 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 FMO4P31512 558 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 EIF3BP55884 814 aaKnown RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 FRG1Q14331 258 aaKnown RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 ISXQ2M1V0 245 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 NKAIN2Q5VXU1 208 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 DUS1LQ6P1R4 473 aaKnown RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 TRMT10BQ6PF06 316 aaKnown RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 CNTN4Q8IWV2 1026 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 TRIM48Q8IWZ4 208 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 CALML6Q8TD86 181 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 CERS2Q96G23 380 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 C12orf66Q96MD2 445 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 DEPDC7Q96QD5 511 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 FAM167BQ9BTA0 163 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 TBC1D10AQ9BXI6 508 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 FBXO6Q9NRD1 293 aaPredicted RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 IARS2Q9NSE4 1012 aaKnown RBP21.86■■□□□ 1.09
PTCD3-203ENST00000409783 ZDHHC18Q9NUE0 388 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 FBXO5Q9UKT4 447 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 CDYLQ9Y232 598 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 CRYL1Q9Y2S2 319 aa21.86■■□□□ 1.09
PTCD3-203ENST00000409783 F8W8V4 182 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 CSO75390 466 aaKnown RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 GPC4O75487 556 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 CSF2RBP32927 897 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 CD151P48509 253 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 EPHA4P54764 986 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 GPLD1P80108 840 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 MPP1Q00013 466 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 GUCY2DQ02846 1103 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 GPR18Q14330 331 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 BRD3Q15059 726 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 AMZ1Q400G9 498 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 PTRHD1Q6GMV3 140 aaKnown RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 ZNF549Q6P9A3 640 aa21.85■■□□□ 1.09
PTCD3-203ENST00000409783 ZNF574Q6ZN55 896 aaPredicted RBP21.85■■□□□ 1.09
PTCD3-203ENST00000409783 B3GNT8Q7Z7M8 397 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms