RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DEFB109BQ30KR1 87 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ARMC6Q6NXE6 501 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 C16orf46Q6P387 395 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 UBL4BQ8N7F7 174 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TTC13Q8NBP0 860 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 CCDC110Q8TBZ0 833 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 HM13Q8TCT9 377 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ELMO2Q96JJ3 720 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 COPS8Q99627 209 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 CCM2Q9BSQ5 444 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TRIM4Q9C037 500 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 VPS37BQ9H9H4 285 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ARNT2Q9HBZ2 717 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 PADI1Q9ULC6 663 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 IGHV5-51A0A0C4DH38 117 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 RCCD1A6NED2 376 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 AGAP14A8MT82 685 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 PYCARD-AS1I3L0S3 204 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 PRLHRP49683 370 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 VAV2P52735 878 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
CBX3-203ENST00000409747 XIAPP98170 497 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 KRT33BQ14525 404 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 GSE1Q14687 1217 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 GPR33Q49SQ1 333 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 ARHGEF18Q6ZSZ5 1173 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 SNX20Q7Z614 316 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 SYCE1Q8N0S2 351 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 NXPE1Q8N323 547 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 SEC14L1Q92503 715 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 INSM2Q96T92 566 aaPredicted RBP14.4□□□□□ -0.1
CBX3-203ENST00000409747 KIR3DX1Q9H7L2 352 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 HRASLS2Q9NWW9 162 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 SLC24A2Q9UI40 661 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 CFAP20Q9Y6A4 193 aaKnown RBP14.4□□□□□ -0.1
CBX3-203ENST00000409747 DUSP10Q9Y6W6 482 aa14.4□□□□□ -0.1
CBX3-203ENST00000409747 UBR5O95071 2799 aaPredicted RBP14.39□□□□□ -0.11
CBX3-203ENST00000409747 C21orf140B9A014 251 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 MATN2O00339 956 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 RECKO95980 971 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 PPP1CAP62136 330 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 HSD11B2P80365 405 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 KIAA1328Q86T90 577 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 LRRC57Q8N9N7 239 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 OR13C4Q8NGS5 318 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 OR8K5Q8NH50 307 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 ALG3Q92685 438 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 MAP3K3Q99759 626 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 FAM8A1Q9UBU6 413 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 ANAPC2Q9UJX6 822 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 AMFRQ9UKV5 643 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 PCDHGA6Q9Y5G7 932 aa14.39□□□□□ -0.11
CBX3-203ENST00000409747 MRPS18BQ9Y676 258 aaKnown RBP14.39□□□□□ -0.11
CBX3-203ENST00000409747 C17orf113A0A1B0GUU1 675 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 MIF4GDA9UHW6 222 aaKnown RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 KATNA1O75449 491 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 ZBTB11O95625 1053 aaPredicted RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 ATP1B2P14415 290 aaPredicted RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 FOLR1P15328 257 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 PRKAA1Q13131 559 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 OLIG2Q13516 323 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 P3H1Q32P28 736 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 DUS1LQ6P1R4 473 aaKnown RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 ZNF449Q6P9G9 518 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 PEX26Q7Z412 305 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 KLHDC8BQ8IXV7 354 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 LRRC40Q9H9A6 602 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 LHX9Q9NQ69 397 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 FGF21Q9NSA1 209 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 POLHQ9Y253 713 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 REXO2Q9Y3B8 237 aaKnown RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 GRID2IPA4D2P6 1211 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 IFRD1O00458 451 aaPredicted RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 F8A1P23610 371 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TUBB4BP68371 445 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TMPRSS15P98073 1019 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TLE1Q04724 770 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 MSLNQ13421 630 aaPredicted RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 DNASE1L3Q13609 305 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TUBB2AQ13885 445 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 RAD9BQ6WBX8 426 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 PTRH1Q86Y79 214 aaKnown RBP14.38□□□□□ -0.11
CBX3-203ENST00000409747 D2HGDHQ8N465 521 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 ACRBPQ8NEB7 543 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 ACVR1CQ8NER5 493 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 TUBB2BQ9BVA1 445 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 LACRTQ9GZZ8 138 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
CBX3-203ENST00000409747 OR6C74A6NCV1 312 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 H7C0S8 307 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 LDB2O43679 373 aa14.37□□□□□ -0.11
CBX3-203ENST00000409747 SGTAO43765 313 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms