RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DLG3Q92796 817 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM159Q96B96 161 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 SHDQ96IW2 340 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 NSUN5Q96P11 429 aaKnown RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM120AQ9BXJ8 343 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ERVK-6Q9BXR3 956 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CYP8B1Q9UNU6 501 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CA5BQ9Y2D0 317 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 KPNA5O15131 536 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 TGDSO95455 350 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-204ENST00000409727 IGFALSP35858 605 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 ARFIP2P53365 341 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 CLDN2P57739 230 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 STARD6P59095 220 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 NFKB2Q00653 900 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
CHMP3-204ENST00000409727 FZD5Q13467 585 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 UNC50Q53HI1 259 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 PLEKHS1Q5SXH7 462 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF547Q8IVP9 402 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 CFAP206Q8IYR0 622 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 FOXJ1Q92949 421 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 L3HYPDHQ96EM0 354 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 COX14Q96I36 57 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 CNDP1Q96KN2 507 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 PPP1R36Q96LQ0 422 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 EGFL8Q99944 293 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 C1QTNF7Q9BXJ2 289 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 TPSD1Q9BZJ3 242 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 ILKAPQ9H0C8 392 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-204ENST00000409727 GSTO2Q9H4Y5 243 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 TBC1D17Q9HA65 648 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 KCNK13Q9HB14 408 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 CDYLQ9Y232 598 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 TRIOO75962 3097 aa12.22□□□□□ -0.45
CHMP3-204ENST00000409727 ANKRD12Q6UB98 2062 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 KRT87PA6NCN2 255 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM233B4DJY2 109 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 FFAR2O15552 330 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 VEGFDO43915 354 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 NPHS1O60500 1241 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 LILRB5O75023 590 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ENO3P13929 434 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 PDHA2P29803 388 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 PXNP49023 591 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ABRQ12979 859 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 AGERQ15109 404 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 BCL7AQ4VC05 210 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 SH2D4BQ5SQS7 431 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 VWA5B1Q5TIE3 1220 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 FRMD7Q6ZUT3 714 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 UBE2R2Q712K3 238 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 WDR75Q8IWA0 830 aaKnown RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 OR2T34Q8NGX1 318 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 RLN3Q8WXF3 142 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 TEX101Q9BY14 249 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 SEMA4BQ9NPR2 832 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 TM7SF3Q9NS93 570 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 KLHL42Q9P2K6 505 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ZDHHC2Q9UIJ5 367 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 MOSPD1Q9UJG1 213 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 OARD1Q9Y530 152 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 ASB1Q9Y576 335 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 USH1CQ9Y6N9 552 aa12.21□□□□□ -0.45
CHMP3-204ENST00000409727 LRRC72A6NJI9 287 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 CHURC1-FNTBB4DL54 471 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 H0Y8X5 98 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 PPP6CO00743 305 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 UBFD1O14562 309 aaKnown RBP12.21□□□□□ -0.46
CHMP3-204ENST00000409727 SCAMP1O15126 338 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 NUAK1O60285 661 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 SEMA4FO95754 770 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 VCLP18206 1134 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 ALDH18A1P54886 795 aaKnown RBP12.21□□□□□ -0.46
CHMP3-204ENST00000409727 GBX1Q14549 363 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 MAP7D1Q3KQU3 841 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 NEK5Q6P3R8 708 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 SYNPOQ8N3V7 929 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 TRPC4APQ8TEL6 797 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 EBF4Q9BQW3 602 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.46
CHMP3-204ENST00000409727 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 NUDT4Q9NZJ9 180 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 USP36Q9P275 1121 aaKnown RBP12.21□□□□□ -0.46
CHMP3-204ENST00000409727 GULP1Q9UBP9 304 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 CIDEBQ9UHD4 219 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 RAP2CQ9Y3L5 183 aa12.21□□□□□ -0.46
CHMP3-204ENST00000409727 POM121BA6NF01 834 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 GPC4O75487 556 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms