RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 SKA2Q8WVK7 121 aaPredicted RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 STON2Q8WXE9 905 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 FGF13Q92913 245 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 FRMD6Q96NE9 622 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 CDRT15Q96T59 188 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 ACOX2Q99424 681 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 FAM126AQ9BYI3 521 aaPredicted RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 TUBB1Q9H4B7 451 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 FAM83DQ9H4H8 585 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 NSUN3Q9H649 340 aaKnown RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 NOL11Q9H8H0 719 aaKnown RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 PCDH12Q9NPG4 1184 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 SPATS2LQ9NUQ6 558 aaKnown RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 PKD2L2Q9NZM6 624 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 FAM8A1Q9UBU6 413 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 IL36AQ9UHA7 158 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 MBD1Q9UIS9 605 aaPredicted RBP3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF225Q9UK10 706 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 ADAMTS6Q9UKP5 1117 aa3.92□□□□□ -1.78
LRRTM4-201ENST00000409088 OTOL1A6NHN0 477 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C16orf96A6NNT2 1141 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 AGAP14A8MT82 685 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HEPACAM2A8MVW5 462 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PRRT4C9JH25 899 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RFXAPO00287 272 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SLC22A2O15244 555 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RAD51BO15315 384 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 KLK8O60259 260 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TBX10O75333 385 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 KATNA1O75449 491 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ESRRBO95718 433 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 BAG2O95816 211 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MLYCDO95822 493 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RPSAP08865 295 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ALDOCP09972 364 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 OR56A5P0C7T3 313 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CYP2A6P11509 494 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HGFP14210 728 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TCF3P15923 654 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 VIPR1P32241 457 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CTHP32929 405 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MSX2P35548 267 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ETV3P41162 512 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GDF5P43026 501 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PTDSS1P48651 473 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PKNOX1P55347 436 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ACTR3P61158 418 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 STX1BP61266 288 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 B4GALNT1Q00973 533 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CREB5Q02930 508 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SQLEQ14534 574 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RPS6KA2Q15349 733 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PHKG1Q16816 387 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TTLL9Q3SXZ7 439 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ICE2Q659A1 982 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PGM2L1Q6PCE3 622 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GPRIN3Q6ZVF9 776 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 FBXW8Q8N3Y1 598 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 VN1R2Q8NFZ6 395 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HMGCLL1Q8TB92 370 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF483Q8TF39 744 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NANOS1Q8WY41 292 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 DLG3Q92796 817 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SMARCD2Q92925 531 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NXPE3Q969Y0 559 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ASB16Q96NS5 453 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C19orf43Q9BQ61 176 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 MRPL1Q9BYD6 325 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 WDR41Q9HAD4 459 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ZDHHC4Q9NPG8 344 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NUDT4Q9NZJ9 180 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 DEC1Q9P2X7 70 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 STOML1Q9UBI4 398 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 FBXO10Q9UK96 956 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 TMPRSS11EQ9UL52 423 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 POMPQ9Y244 141 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 UPK3BL1B0FP48 263 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 C9JVG2 144 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 UPK3BL2E5RIL1 263 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 E2F3O00716 465 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CCNT2O60583 730 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 NFATC1O95644 943 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CHEK2O96017 543 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 RPLP1P05386 114 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 UROSP10746 265 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 LBPP18428 481 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GNAZP19086 355 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 FSHRP23945 695 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 CCR7P32248 378 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 STX5Q13190 355 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 GTF2H2Q13888 395 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 BOP1Q14137 746 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 HERC3Q15034 1050 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 DUSP6Q16828 381 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 PREPLQ4J6C6 727 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 FNDC3BQ53EP0 1204 aaKnown RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF805Q5CZA5 627 aa3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 ZNF648Q5T619 568 aaPredicted RBP3.91□□□□□ -1.78
LRRTM4-201ENST00000409088 SAMD5Q5TGI4 173 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms