RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SPTY2D1-AS1A0A0U1RR47 76 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 C17orf113A0A1B0GUU1 675 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 SLC5A10A0PJK1 596 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 EIF3FO00303 357 aaPredicted RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 TNFRSF10CO14798 259 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 SCAMP1O15126 338 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 PLIN3O60664 434 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 PROCP04070 461 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ACP5P13686 325 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ENO3P13929 434 aaPredicted RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 CHN1P15882 459 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 TFEBP19484 476 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ITPKAP23677 461 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ETV4P43268 484 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 DHPSP49366 369 aaPredicted RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 ATP6V0D1P61421 351 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 IRX4P78413 519 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 NFE2L1Q14494 772 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ACAP2Q15057 778 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 SEPT7Q16181 437 aaKnown RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 ALG11Q2TAA5 492 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 PLK5Q496M5 336 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 LYSMD4Q5XG99 296 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 IQCHQ86VS3 1027 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 MYO1HQ8N1T3 1032 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ARMC2Q8NEN0 867 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 GLMNQ92990 594 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 TSACCQ96A04 125 aaPredicted RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 PTERQ96BW5 349 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 PDLIM5Q96HC4 596 aaKnown RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 OR2M4Q96R27 311 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 ZSCAN32Q9NX65 697 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 OGFRQ9NZT2 677 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 DNAJC16Q9Y2G8 782 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 GPSM3Q9Y4H4 160 aa20.09■□□□□ 0.81
CHKB-201ENST00000406938 DNMT3AQ9Y6K1 912 aaPredicted RBP20.09■□□□□ 0.81
CHKB-201ENST00000406938 NPEPPSL1A6NEC2 478 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 TK2O00142 265 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 BTN3A1O00481 513 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 LIN7AO14910 233 aaPredicted RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 POLR3GO15318 223 aaPredicted RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 SLCO2B1O94956 709 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 SRP54P61011 504 aaKnown RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 FZD2Q14332 565 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 CCDC153Q494R4 210 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 TECRLQ5HYJ1 363 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 LVRNQ6Q4G3 990 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 FAM83HQ6ZRV2 1179 aaPredicted RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 CFAP206Q8IYR0 622 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 TIMM29Q9BSF4 260 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 COL25A1Q9BXS0 654 aaPredicted RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 ALG9Q9H6U8 611 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 ATXN2Q99700 1313 aaKnown RBP20.08■□□□□ 0.8
CHKB-201ENST00000406938 CEP192Q8TEP8 1941 aa20.08■□□□□ 0.8
CHKB-201ENST00000406938 GYS2P54840 703 aa20.07■□□□□ 0.8
CHKB-201ENST00000406938 WDR4P57081 412 aaKnown RBP20.07■□□□□ 0.8
CHKB-201ENST00000406938 OVGP1Q12889 678 aa20.07■□□□□ 0.8
CHKB-201ENST00000406938 RD3Q7Z3Z2 195 aa20.07■□□□□ 0.8
CHKB-201ENST00000406938 ISCA2Q86U28 154 aa20.07■□□□□ 0.8
CHKB-201ENST00000406938 CCDC63Q8NA47 563 aa20.07■□□□□ 0.8
CHKB-201ENST00000406938 SKA2Q8WVK7 121 aaPredicted RBP20.07■□□□□ 0.8
CHKB-201ENST00000406938 MRPL46Q9H2W6 279 aaKnown RBP20.07■□□□□ 0.8
CHKB-201ENST00000406938 CPSF2Q9P2I0 782 aaKnown RBP20.07■□□□□ 0.8
CHKB-201ENST00000406938 KLHL33A6NCF5 533 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 CDC7O00311 574 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 BCAT2O15382 392 aaPredicted RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 RRP9O43818 475 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 PDHA2P29803 388 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 CNR2P34972 360 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 EIF2B5Q13144 721 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 OR4D1Q15615 310 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 TSNQ15631 228 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 CEP68Q76N32 757 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 PARGQ86W56 976 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 DCP2Q8IU60 420 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 SLC22A15Q8IZD6 547 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 TMEM151AQ8N4L1 468 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 ZBTB44Q8NCP5 570 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 KIAA1191Q96A73 305 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 PAIP2Q9BPZ3 127 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 MRPL57Q9BQC6 102 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 TFB2MQ9H5Q4 396 aaKnown RBP20.06■□□□□ 0.8
CHKB-201ENST00000406938 KLC4Q9NSK0 619 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 KCNK6Q9Y257 313 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 PLEKHM1Q9Y4G2 1056 aa20.06■□□□□ 0.8
CHKB-201ENST00000406938 RBP1P09455 135 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 SBK3P0C264 359 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 DHRS4L1P0CG22 281 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 VCLP18206 1134 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 DMPKQ09013 629 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 HHATQ5VTY9 493 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 CYHR1Q6ZMK1 362 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 HID1Q8IV36 788 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 OSGEPL1Q9H4B0 414 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 INTS9Q9NV88 658 aaKnown RBP20.05■□□□□ 0.8
CHKB-201ENST00000406938 DGKBQ9Y6T7 804 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 THADAQ6YHU6 1953 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 USP34Q70CQ2 3546 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 PRR33A8MZF0 331 aa20.05■□□□□ 0.8
CHKB-201ENST00000406938 H3BM21 787 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms