RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 MAGEH1Q9H213 219 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 DPEP2Q9H4A9 486 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 SEC61A2Q9H9S3 476 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 ANLNQ9NQW6 1124 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 MBNL1Q9NR56 388 aaKnown RBP6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 MKS1Q9NXB0 559 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 LRIT1Q9P2V4 623 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 OR1A2Q9Y585 309 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 SNX10Q9Y5X0 201 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 RNF215Q9Y6U7 377 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 TENM4Q6N022 2769 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 TMEM131Q92545 1883 aa6.75□□□□□ -1.33
CEACAM1-208ENST00000403461 GTPBP10A4D1E9 387 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 BECN2A8MW95 431 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 GOLGA8SH3BPF8 625 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CPNE6O95741 557 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 LSM8O95777 96 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 PCCBP05166 539 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 GAAP10253 952 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 SDC4P31431 198 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CASRP41180 1078 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 MTNR1BP49286 362 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 PPM1FP49593 454 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 STX17P56962 302 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 KIAA1024LP59773 190 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 RAC3P60763 192 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CYP4F2P78329 520 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CD69Q07108 199 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 SRSF6Q13247 344 aaKnown RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 MTM1Q13496 603 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CLCA4Q14CN2 919 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 AMZ1Q400G9 498 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 TMEM52BQ4KMG9 183 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 C14orf28Q4W4Y0 310 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 LRRC73Q5JTD7 316 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 ATXN7L2Q5T6C5 722 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 OTUD1Q5VV17 481 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 ISM2Q6H9L7 571 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 BRAT1Q6PJG6 821 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 SPRED1Q7Z699 444 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 FAM131BQ86XD5 332 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 UNC5BQ8IZJ1 945 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 PLA2G15Q8NCC3 412 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 GPR156Q8NFN8 814 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 OR56A4Q8NGH8 313 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 C9orf43Q8TAL5 461 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 HCAR2Q8TDS4 363 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 TSPEARQ8WU66 669 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 NT5C3BQ969T7 300 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 SLC7A6OSQ96CW6 309 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 TBC1D31Q96DN5 1066 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 HMCESQ96FZ2 354 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CFAP57Q96MR6 1250 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 DPYSL5Q9BPU6 564 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 CRACR2AQ9BSW2 395 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 FUCA2Q9BTY2 467 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 APOOQ9BUR5 198 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 GSDMCQ9BYG8 508 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 TTYH3Q9C0H2 523 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 DKK3Q9UBP4 350 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 ZNF212Q9UDV6 495 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 OR12D3Q9UGF7 316 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 MAN1B1Q9UKM7 699 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 PNMA8BQ9ULN7 279 aaPredicted RBP6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 DGKBQ9Y6T7 804 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 PLXNA2O75051 1894 aa6.74□□□□□ -1.33
CEACAM1-208ENST00000403461 A0A1W2PR48 441 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 I6L893 689 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 CASC3O15234 703 aaKnown RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 KDELR3O43731 214 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 TMCC1O94876 653 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 LY86O95711 162 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 DESP17661 470 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 CR2P20023 1033 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ALDH4A1P30038 563 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 CSTF2P33240 577 aaKnown RBP eCLIP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ACVRL1P37023 503 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 MC1RQ01726 317 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 MGAT5Q09328 741 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ILF3Q12906 894 aaKnown RBP eCLIP6.73□□□□□ -1.334e-6■■■■□ 20.1
CEACAM1-208ENST00000403461 TRA2AQ13595 282 aaKnown RBP eCLIP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 WSCD2Q2TBF2 565 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 INO80DQ53TQ3 878 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 GJB7Q6PEY0 223 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 LEKR1Q6ZMV7 388 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ARCQ7LC44 396 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 DNAAF5Q86Y56 855 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 OR14K1Q8NGZ2 314 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 HTR3CQ8WXA8 447 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 PDXPQ96GD0 296 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 ZNF641Q96N77 438 aaPredicted RBP6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 TAAR9Q96RI9 348 aa6.73□□□□□ -1.33
CEACAM1-208ENST00000403461 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms