RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LRRC53A6NM62 1247 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TMEM150CB9EJG8 249 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PRSS44E7EML9 344 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CBSLP0DN79 551 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GZMAP12544 262 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ST6GAL1P15907 406 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 POLR2CP19387 275 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CBSP35520 551 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ARL4DP49703 201 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 RRADP55042 308 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HIF1AQ16665 826 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IFI16Q16666 785 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 DCAF10Q5QP82 559 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NUP210LQ5VU65 1888 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 B4GALNT4Q76KP1 1039 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PPP1R32Q7Z5V6 425 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZC3H18Q86VM9 953 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 AMZ2Q86W34 360 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OR8K5Q8NH50 307 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CPT1BQ92523 772 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CLIP3Q96DZ5 547 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SGSM3Q96HU1 749 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 VPS35Q96QK1 796 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KLHL25Q9H0H3 589 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 WWP1Q9H0M0 922 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ISCUQ9H1K1 167 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ACTR5Q9H9F9 607 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MAGEE1Q9HCI5 957 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IL26Q9NPH9 171 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IMP3Q9NV31 184 aaKnown RBP11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SLC24A2Q9UI40 661 aa11.56□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ALOX12BO75342 701 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 UMODP07911 640 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SKILP12757 684 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PVRP15151 417 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LMAN1P49257 510 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ELOAQ14241 798 aaKnown RBP11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KRT81Q14533 505 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CT47A1Q5JQC4 288 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 METRNLQ641Q3 311 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TMEM220Q6QAJ8 160 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NIPA2Q8N8Q9 360 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SPATA22Q8NHS9 363 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 FAF2Q96CS3 445 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MOCOSQ96EN8 888 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IMP4Q96G21 291 aaKnown RBP11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 POMT2Q9UKY4 750 aa11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 NOVA2Q9UNW9 492 aaKnown RBP11.55□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CCDC78A2IDD5 438 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OR2AG2A6NM03 316 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 BTN3A3O00478 584 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZNF749O43361 778 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LDB2O43679 373 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SGTAO43765 313 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MT-CYBP00156 380 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CA4P22748 312 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PBLDP30039 288 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HALP42357 657 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SOX8P57073 446 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TAS2R40P59535 323 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 IFI35P80217 286 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 TESK1Q15569 626 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PCSK7Q16549 785 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 LYPLAL1Q5VWZ2 237 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KLHL35Q6PF15 583 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 CDHR3Q6ZTQ4 885 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 MICALCLQ6ZW33 695 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 FJX1Q86VR8 437 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OOSP2Q86WS3 158 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 OR4E2Q8NGC2 313 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 HDAC11Q96DB2 347 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 RMDN2Q96LZ7 410 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ADGRE3Q9BY15 652 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GPR63Q9BZJ6 419 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 FAM60AQ9NP50 221 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SLC22A11Q9NSA0 550 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 P4HTMQ9NXG6 502 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 G3BP2Q9UN86 482 aaKnown RBP11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SCINQ9Y6U3 715 aa11.54□□□□□ -0.56
SPTLC1P3-201ENST00000403408 STSP08842 583 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PRKCIP41743 596 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PREPP48147 710 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 GABRA4P48169 554 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PIGHQ14442 188 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 SSPNQ14714 243 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 PTPRCAPQ14761 206 aa11.53□□□□□ -0.56
SPTLC1P3-201ENST00000403408 ZIC1Q15915 447 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms