RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 IFT172Q9UG01 1749 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ZNF726A6NNF4 738 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 RPP40O75818 363 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CDK14O94921 469 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 C1RP00736 705 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 HEXBP07686 556 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ITGA2BP08514 1039 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 AHCYP23526 432 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 OLR1P78380 273 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 RAB39AQ14964 217 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 BRMS1LQ5PSV4 323 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SPPL2BQ8TCT7 592 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 HDAC10Q969S8 669 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ASPNQ9BXN1 380 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SMURF2Q9HAU4 748 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 DIP2AQ14689 1571 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 TSPAN4O14817 238 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 TREHO43280 583 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 BANF1O75531 89 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 METTL18O95568 372 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 FABP3P05413 133 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ABHD2P08910 425 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CTSKP43235 329 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 AP3S2P59780 193 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 DPYSQ14117 519 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SNAPC1Q16533 368 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ERICH5Q6P6B1 374 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ADGRA1Q86SQ6 560 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 IQCKQ8N0W5 287 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SCGB1D2O95969 90 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 PRH1P02810 166 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 PRKCHP24723 683 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 S100A2P29034 98 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SMARCB1Q12824 385 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 HYAL2Q12891 473 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 LRRC38Q5VT99 294 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 THAP5Q7Z6K1 395 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 FAM35AQ86V20 835 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CLK4Q9HAZ1 481 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CCDC59Q9P031 241 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 RPL22P35268 128 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ACTR1BP42025 376 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 MTHFRP42898 656 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 NR1H2P55055 460 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 ACTR1AP61163 376 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CTBP1Q13363 440 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 AKAP14Q86UN6 197 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 PIGZQ86VD9 579 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 GPALPP1Q8IXQ4 340 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 C1GALT1C1Q96EU7 318 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CITED4Q96RK1 184 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 MGME1Q9BQP7 344 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 CHCHD6Q9BRQ6 235 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 DUSP16Q9BY84 665 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 SERINC1Q9NRX5 453 aa10.92□□□□□ -0.66
CACNA1C-215ENST00000399637 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 CALCAP01258 141 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 ADH5P11766 374 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 FGL2Q14314 439 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 LINGO4Q6UY18 593 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 PLPPR4Q7Z2D5 763 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 PIWIL4Q7Z3Z4 852 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 GALNT5Q7Z7M9 940 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 TMEM192Q8IY95 271 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 SIDT2Q8NBJ9 832 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 BADQ92934 168 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 RCN3Q96D15 328 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 C12orf66Q96MD2 445 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 CPQQ9Y646 472 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 OR1F1O43749 312 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 CCND3P30281 292 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 GRK5P34947 590 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 CLCN7P51798 805 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 AP2S1P53680 142 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 CDH11P55287 796 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 C2orf80Q0P641 193 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 SNTA1Q13424 505 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 TUSC3Q13454 348 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 DPF1Q92782 380 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 LRMDAQ9H2I8 198 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 MRM3Q9HC36 420 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 EML1O00423 815 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 B3GALT2O43825 422 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 PAPSS2O95340 614 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 ZBTB11O95625 1053 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 ALOX5P09917 674 aa10.91□□□□□ -0.66
CACNA1C-215ENST00000399637 HNRNPLP14866 589 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms