RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PAN2Q504Q3 1202 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 Q6ZSR9 355 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 GPRIN3Q6ZVF9 776 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 P2RY8Q86VZ1 359 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OR6J1Q8NGC5 347 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OR10Q1Q8NGQ4 319 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 PSMG2Q969U7 264 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 FAM162AQ96A26 154 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 FUBP1Q96AE4 644 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 DACH2Q96NX9 599 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 SP110Q9HB58 689 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 POLR3HQ9Y535 204 aaPredicted RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 BCKDKO14874 412 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 LSM1O15116 133 aaKnown RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 NPPAP01160 153 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 SMPD1P17405 629 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 SETMARQ53H47 684 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 BRMS1LQ5PSV4 323 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 RPL3LQ92901 407 aaKnown RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 BTBD2Q9BX70 525 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 TMLHEQ9NVH6 421 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 SLCO3A1Q9UIG8 710 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 C3orf18Q9UK00 162 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 CDH9Q9ULB4 789 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 PARNO95453 639 aaKnown RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 RAD51Q06609 339 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 EIF4EBP2Q13542 120 aaPredicted RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 PWP1Q13610 501 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 CYP20A1Q6UW02 462 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 NANOGNBQ7Z5D8 188 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 NCLNQ969V3 563 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 NSMCE3Q96MG7 304 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 CTRCQ99895 268 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 TPK1Q9H3S4 243 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 IKZF5Q9H5V7 419 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 USE1Q9NZ43 259 aa13.78□□□□□ -0.2
APOB-202ENST00000399256 TSR3Q9UJK0 312 aaKnown RBP13.78□□□□□ -0.2
APOB-202ENST00000399256 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 TTC34A8MYJ7 566 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.2
APOB-202ENST00000399256 DNAJB5O75953 348 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 FADS2O95864 444 aaKnown RBP13.77□□□□□ -0.2
APOB-202ENST00000399256 DCTP40126 519 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 CACNB2Q08289 660 aaPredicted RBP13.77□□□□□ -0.2
APOB-202ENST00000399256 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.2
APOB-202ENST00000399256 NPTX1Q15818 432 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.2
APOB-202ENST00000399256 ARMC8Q8IUR7 673 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 EID3Q8N140 333 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 SVOPLQ8N434 492 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 YIPF6Q96EC8 236 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 GPR21Q99679 349 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 DERL2Q9GZP9 239 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 POPDC3Q9HBV1 291 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 SYTL2Q9HCH5 934 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 CSNK1G1Q9HCP0 422 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 NECTIN3Q9NQS3 549 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 MED16Q9Y2X0 877 aa13.77□□□□□ -0.2
APOB-202ENST00000399256 S100A1P23297 94 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 CD6P30203 668 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 NR4A2P43354 598 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 SEPHS1P49903 392 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 STC1P52823 247 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 NR6A1Q15406 480 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 UTS2BQ765I0 119 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 ASPSCR1Q9BZE9 553 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 CPA4Q9UI42 421 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 CCL15-CCL14A0A0B4J2E2 113 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 RRN3P2A6NIE6 340 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 MLYCDO95822 493 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 MAGP20916 626 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 ERVPABLB-1P60509 514 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 NRG1Q02297 640 aaPredicted RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 CCL15Q16663 113 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 PIK3R6Q5UE93 754 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 LAIR1Q6GTX8 287 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 B3GNT8Q7Z7M8 397 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms