RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 WDR74Q6RFH5 385 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PACS1Q6VY07 963 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MCUQ8NE86 351 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RSC1A1Q92681 617 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NAF1Q96HR8 494 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ZNF578Q96N58 590 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CMKLR1Q99788 373 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CDRT15L2A8MXV6 281 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ITGA2BP08514 1039 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CCL4P13236 92 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AMD1P17707 334 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 EIF2S3P41091 472 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 GFERP55789 205 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PTK6Q13882 451 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LYPLAL1Q5VWZ2 237 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IGF2-ASQ6U949 168 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SLCO2A1Q92959 643 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TTC1Q99614 292 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR52A5Q9H2C5 316 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 VPS37BQ9H9H4 285 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 THSD1Q9NS62 852 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PDP2Q9P2J9 529 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PIKFYVEQ9Y2I7 2098 aa13.77□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SDR42E2A6NKP2 422 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IQCF5A8MTL0 148 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MLNP12872 115 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ITGB6P18564 788 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 IVDP26440 423 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ITPKBP27987 946 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MAGEA3P43357 314 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MAPK10P53779 464 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ERVPABLB-1P60509 514 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SYT10Q6XYQ8 523 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HNRNPLLQ8WVV9 542 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ELMO1Q92556 727 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FCRL3Q96P31 734 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DPYSL5Q9BPU6 564 aa13.76□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DNALI1O14645 258 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 HGSO14964 777 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TTI1O43156 1089 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BANF1O75531 89 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OR56A5P0C7T3 313 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FGF3P11487 239 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CASQ1P31415 396 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SLC5A2P31639 672 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CAPZBP47756 277 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TTPAP49638 278 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CSE1LP55060 971 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PPP1CAP62136 330 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 DR1Q01658 176 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TRA2AQ13595 282 aaKnown RBP eCLIP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PLCL1Q15111 1095 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 AARS2Q5JTZ9 985 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 JAMLQ86YT9 394 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PLXDC1Q8IUK5 500 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PHC3Q8NDX5 983 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LKAAEAR1Q8TD35 194 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 PMEPA1Q969W9 287 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SIGLEC10Q96LC7 697 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TGM7Q96PF1 710 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 NRTNQ99748 197 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 TRIM51Q9BSJ1 452 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 EPB41L1Q9H4G0 881 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 OCIAD1Q9NX40 245 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 LOC400499M0QZD8 3231 aa13.75□□□□□ -0.21
HLA-DQB1-202ENST00000399079 A0A087WV48 116 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FAM237BA0A1B0GVD1 139 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 QSOX1O00391 747 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 KIF1CO43896 1103 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 FTH1P02794 183 aa13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 F7P08709 466 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB1-202ENST00000399079 CCR7P32248 378 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms