RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CSTF2P33240 577 aaKnown RBP eCLIP14.28□□□□□ -0.126e-12■■■□□ 17.9
SEC13-208ENST00000397109 RPL22P35268 128 aaKnown RBP14.28□□□□□ -0.12
SEC13-208ENST00000397109 CFHR1Q03591 330 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 CACNG1Q06432 222 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 C16orf72Q14CZ0 275 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 ZRANB3Q5FWF4 1079 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 TMEM164Q5U3C3 297 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 BROXQ5VW32 411 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 DET1Q7L5Y6 550 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 PLXDC1Q8IUK5 500 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 SPACA3Q8IXA5 215 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 GOLGA6L1Q8N7Z2 621 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 AGBL5Q8NDL9 886 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 OR2L2Q8NH16 312 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 RANBP9Q96S59 729 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 CASS4Q9NQ75 786 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
SEC13-208ENST00000397109 PIH1D1Q9NWS0 290 aaKnown RBP14.28□□□□□ -0.12
SEC13-208ENST00000397109 ACSL5Q9ULC5 683 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 IGLV3-16A0A075B6K0 115 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 AP3B1O00203 1094 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 KRT14P02533 472 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 HGFP14210 728 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 ADRA1DP25100 572 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 ITPKBP27987 946 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 PBLDP30039 288 aaPredicted RBP14.27□□□□□ -0.12
SEC13-208ENST00000397109 SLC5A2P31639 672 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 UCNP55089 124 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 CAV1Q03135 178 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 PTK6Q13882 451 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 NFE2L1Q14494 772 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 NLRP9Q7RTR0 991 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 TAS2R42Q7RTR8 314 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 BBOF1Q8ND07 529 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.27□□□□□ -0.12
SEC13-208ENST00000397109 NAF1Q96HR8 494 aaKnown RBP14.27□□□□□ -0.12
SEC13-208ENST00000397109 TBC1D10AQ9BXI6 508 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 FAM96AQ9H5X1 160 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 VPS37BQ9H9H4 285 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 SLC40A1Q9NP59 571 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.12
SEC13-208ENST00000397109 CFAP47Q6ZTR5 3102 aa14.27□□□□□ -0.13
SEC13-208ENST00000397109 ZFYVE26Q68DK2 2539 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 OR52A4PA6NMU1 304 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 CCL22O00626 93 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 UBXN7O94888 489 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 GSTM1P09488 218 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 ZSCAN5DPP0CG00 497 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 AMD1P17707 334 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 ITIH1P19827 911 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 ACRV1P26436 265 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 MAGEA6P43360 314 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 MAPK9P45984 424 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 PRLHRP49683 370 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 MAPK10P53779 464 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 CDK16Q00536 496 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 GSTM4Q03013 218 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 TLE3Q04726 772 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 CLCA4Q14CN2 919 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 PRUNE1Q86TP1 453 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 SERPINA9Q86WD7 417 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 RCBTB1Q8NDN9 531 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 HM13Q8TCT9 377 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 PEX13Q92968 403 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 TTC1Q99614 292 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 CCM2Q9BSQ5 444 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 TMEM9Q9P0T7 183 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 WHRNQ9P202 907 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 WDR37Q9Y2I8 494 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 LAMA5O15230 3695 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
SEC13-208ENST00000397109 QSOX1O00391 747 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 KLK10O43240 276 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 SGTAO43765 313 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 CD82P27701 267 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 ECHS1P30084 290 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 ETV5P41161 510 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 BASP1P80723 227 aaKnown RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 ITIH4Q14624 930 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 RPE65Q16518 533 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 CCDC38Q502W7 563 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 TSTD2Q5T7W7 516 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 LYPLAL1Q5VWZ2 237 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 ZNF449Q6P9G9 518 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 FAM83HQ6ZRV2 1179 aaPredicted RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 CEP128Q6ZU80 1094 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 ARHGAP22Q7Z5H3 698 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 IQCKQ8N0W5 287 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 ZFPM2Q8WW38 1151 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 USP7Q93009 1102 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 TAAR9Q96RI9 348 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 MTRF1LQ9UGC7 380 aaKnown RBP14.25□□□□□ -0.13
SEC13-208ENST00000397109 CELSR3Q9NYQ7 3312 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 B4E171 279 aa14.25□□□□□ -0.13
SEC13-208ENST00000397109 F8W8V4 182 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms