RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 RTKNQ9BST9 563 aa16.1■□□□□ 0.17
AP1S3-202ENST00000396653 PARD6BQ9BYG5 372 aa16.1■□□□□ 0.17
AP1S3-202ENST00000396653 SLC32A1Q9H598 525 aa16.1■□□□□ 0.17
AP1S3-202ENST00000396653 FRYLO94915 3013 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 PCNX2A6NKB5 2137 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 IQCF5A8MTL0 148 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 PDZK1P1A8MUH7 402 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 SNX2O60749 519 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 VPS26AO75436 327 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 GPC4O75487 556 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 LDOC1O95751 146 aaPredicted RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 F7P08709 466 aaPredicted RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 AOAHP28039 575 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 CCR7P32248 378 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 HALP42357 657 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 DUSP3P51452 185 aaPredicted RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 BOP1Q14137 746 aaKnown RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 GBX1Q14549 363 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 NR0B2Q15466 257 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 KLHL38Q2WGJ6 581 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 SYTL3Q4VX76 610 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 C14orf28Q4W4Y0 310 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 UBAP2Q5T6F2 1119 aaKnown RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 UGT3A1Q6NUS8 523 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 IYDQ6PHW0 289 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 OTOAQ7RTW8 1153 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 GLRX5Q86SX6 157 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 PPM1NQ8N819 430 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 KYQ8NBH2 561 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 OR6C4Q8NGE1 309 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 CNDP2Q96KP4 475 aaKnown RBP16.09■□□□□ 0.17
AP1S3-202ENST00000396653 RBBP8Q99708 897 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 OR52A5Q9H2C5 316 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 PRDM8Q9NQV8 689 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 MED16Q9Y2X0 877 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 U3KQA8 63 aa16.09■□□□□ 0.17
AP1S3-202ENST00000396653 EML2O95834 649 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 SLC35G4P0C7Q5 338 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CKMT1AP12532 417 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 BRAFP15056 766 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 ITGB6P18564 788 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CHRM3P20309 590 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 ATP5DP30049 168 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
AP1S3-202ENST00000396653 FASLGP48023 281 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CLCN7P51798 805 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 LIMK2P53671 638 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 TTLL9Q3SXZ7 439 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 GRTP1Q5TC63 336 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CAPRIN2Q6IMN6 1127 aaKnown RBP16.08■□□□□ 0.16
AP1S3-202ENST00000396653 LILRA3Q8N6C8 439 aaPredicted RBP16.08■□□□□ 0.16
AP1S3-202ENST00000396653 MAPK15Q8TD08 544 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 SLC37A2Q8TED4 501 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 NAT6Q93015 286 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CAVIN3Q969G5 261 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 VPS39Q96JC1 886 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 RMDN2Q96LZ7 410 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 EPB41L4BQ9H329 900 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 STN1Q9H668 368 aaKnown RBP16.08■□□□□ 0.16
AP1S3-202ENST00000396653 POT1Q9NUX5 634 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 TAS2R13Q9NYV9 303 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 SIRPGQ9P1W8 387 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 FAM8A1Q9UBU6 413 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CDYLQ9Y232 598 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 DNAH14Q0VDD8 3507 aa16.08■□□□□ 0.16
AP1S3-202ENST00000396653 CEP250Q9BV73 2442 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 FAM95CA0A1B0GW59 222 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 EME2A4GXA9 379 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 EIF3FO00303 357 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 IFRD1O00458 451 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 TNFSF14O43557 240 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SLCO2B1O94956 709 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 CKMT2P17540 419 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 ACP1P24666 158 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 RPL10P27635 214 aaKnown RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SPRP35270 261 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SKIV2L2P42285 1042 aaKnown RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 UBE2IP63279 158 aaKnown RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 DAB2P98082 770 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 EFTUD2Q15029 972 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SEPT7Q16181 437 aaKnown RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 RSPO4Q2I0M5 234 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 RBM20Q5T481 1227 aaKnown RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 HECTD2Q5U5R9 776 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SLC9B2Q86UD5 537 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 PDZD3Q86UT5 571 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SLC22A15Q8IZD6 547 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 CNPY4Q8N129 248 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 ARL14Q8N4G2 192 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 ZBTB2Q8N680 514 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 GPATCH11Q8N954 259 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 CAMK1GQ96NX5 476 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 NDNQ99608 321 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 GPR22Q99680 433 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 WWP1Q9H0M0 922 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 SARS2Q9NP81 518 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms