RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 POP7O75817 140 aaKnown RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TPM2P07951 284 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 HBQ1P09105 142 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 CYP2A7P20853 494 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 AGXTP21549 392 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 MMRN1Q13201 1228 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 GTF2H3Q13889 308 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 GALNT3Q14435 633 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 NCBP2-AS2Q69YL0 99 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 ARMC6Q6NXE6 501 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 FJX1Q86VR8 437 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 TTC30BQ8N4P2 665 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-202ENST00000396629 SERTAD3Q9UJW9 196 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 POMT2Q9UKY4 750 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 PSMD13Q9UNM6 376 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF711Q9Y462 761 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 CSAG2Q9Y5P2 127 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 SCINQ9Y6U3 715 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
SCFD1-202ENST00000396629 A0A1W2PQJ5 194 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 DDX3YO15523 660 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 PIRTP0C851 137 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 GZMAP12544 262 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ARCN1P48444 511 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ARSEP51690 589 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 UBE2HP62256 183 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 SLC25A11Q02978 314 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 NFE2L1Q14494 772 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ATP13A5Q4VNC0 1218 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC183Q5T5S1 534 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 METRNLQ641Q3 311 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ITLN2Q8WWU7 325 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF653Q96CK0 615 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 TRAPPC9Q96Q05 1148 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ERGIC2Q96RQ1 377 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 SLX1AQ9BQ83 275 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 C17orf62Q9BQA9 187 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 GPR63Q9BZJ6 419 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CLSTN2Q9H4D0 955 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ATP13A2Q9NQ11 1180 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 P4HTMQ9NXG6 502 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 SLC24A2Q9UI40 661 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ITGB1BP2Q9UKP3 347 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 SVILO95425 2214 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 MASP2O00187 686 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF749O43361 778 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 LDB2O43679 373 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CD63P08962 238 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CD48P09326 243 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 POLR2CP19387 275 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CDH3P22223 829 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 FOLR3P41439 243 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 PREPP48147 710 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CTSCP53634 463 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 XRCC4Q13426 336 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 PIGHQ14442 188 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 HIF1AQ16665 826 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 B3GNTL1Q67FW5 361 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 FCRL6Q6DN72 434 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 SPNS3Q6ZMD2 512 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 B4GALNT4Q76KP1 1039 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 PPP1R32Q7Z5V6 425 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CNTD1Q8N815 330 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 RASGEF1AQ8N9B8 481 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 OR2Y1Q8NGV0 311 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 DTX3LQ8TDB6 740 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
SCFD1-202ENST00000396629 MRPL47Q9HD33 250 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 IMP3Q9NV31 184 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 PTRH2Q9Y3E5 179 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 CFAP20Q9Y6A4 193 aaKnown RBP8.19□□□□□ -1.1
SCFD1-202ENST00000396629 DCHS2Q6V1P9 2916 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 LGALS16A8MUM7 142 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 E7EQ34 232 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 MATN2O00339 956 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 CBSLP0DN79 551 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 CBSP35520 551 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 AIMP2Q13155 320 aaKnown RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 KRT81Q14533 505 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF169Q14929 603 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF630Q2M218 657 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 MLIPQ5VWP3 458 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 DUS1LQ6P1R4 473 aaKnown RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 NIPA2Q8N8Q9 360 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 GDAP1Q8TB36 358 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 DNAJB14Q8TBM8 379 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 LRRN4Q8WUT4 740 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 TADA1Q96BN2 335 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 PTERQ96BW5 349 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 HDAC11Q96DB2 347 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 C12orf66Q96MD2 445 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 TTC25Q96NG3 672 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms