RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC22A15Q8IZD6 547 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ELMO1Q92556 727 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 GLMNQ92990 594 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 NCKAP1Q9Y2A7 1128 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 USH1CQ9Y6N9 552 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 PLXND1Q9Y4D7 1925 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 NUMA1Q14980 2115 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ATXN2Q99700 1313 aaKnown RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ERICH4A6NGS2 130 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 PRR19A6NJB7 356 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SUPT3HB4E1H0 165 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 MATN2O00339 956 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 E2F3O00716 465 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SLC16A5O15375 505 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 LATO43561 262 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SUPT3HO75486 399 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 HSPA4LO95757 839 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 HOXC4P09017 264 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 AGTR2P50052 363 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 HK2P52789 917 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 CDKL1Q00532 357 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 PCBP2Q15366 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF771Q7L3S4 317 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SPATS2Q86XZ4 545 aaKnown RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 GANCQ8TET4 914 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 UBTD2Q8WUN7 234 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ASZ1Q8WWH4 475 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 KLK6Q92876 244 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 TRMOQ9BU70 441 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 SLC12A9Q9BXP2 914 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ZCCHC2Q9C0B9 1178 aaKnown RBP12.47□□□□□ -0.41
TRIM39-204ENST00000396548 DCTN4Q9UJW0 460 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 PCTPQ9UKL6 214 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 TMEM98Q9Y2Y6 226 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 FFAR2O15552 330 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 PSIP1O75475 530 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 KITP10721 976 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 HSPA14Q0VDF9 509 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 PRKAA1Q13131 559 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 CDKL4Q5MAI5 379 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 OXR1Q8N573 874 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 CCNYL1Q8N7R7 359 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 OR2L2Q8NH16 312 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 EXT2Q93063 718 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 CLDN23Q96B33 292 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 SKA1Q96BD8 255 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 NSUN5Q96P11 429 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 ILKAPQ9H0C8 392 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 SGK2Q9HBY8 427 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 DNAJC28Q9NX36 388 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 MARCOQ9UEW3 520 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 PDE10AQ9Y233 779 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 ZFC3H1O60293 1989 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 EBAG9O00559 213 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 ACADMP11310 421 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 EEF1DP29692 281 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 RPL14P50914 215 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 SP140Q13342 867 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 GALNTL6Q49A17 601 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 KIAA1324Q6UXG2 1013 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 WDR75Q8IWA0 830 aaKnown RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 FITM2Q8N6M3 262 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 MAPK15Q8TD08 544 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 PPP4R1Q8TF05 950 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 RHBDF1Q96CC6 855 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 TMEM79Q9BSE2 394 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 FOXQ1Q9C009 403 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 EBF2Q9HAK2 575 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 ZBTB26Q9HCK0 441 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-204ENST00000396548 ABCF3Q9NUQ8 709 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 OR1A2Q9Y585 309 aa12.46□□□□□ -0.41
TRIM39-204ENST00000396548 CCT8L1PA6NM43 557 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 GPR89AB7ZAQ6 455 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 PPP6CO00743 305 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 C8GP07360 202 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 ENO2P09104 434 aaPredicted RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 GPR89BP0CG08 455 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 GGT5P36269 586 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 AQP5P55064 265 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 SH3BP2P78314 561 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms