RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ANK1P16157 1881 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 SDR42E2A6NKP2 422 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 TADA2AO75478 443 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 ALDH3B2P48448 385 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 ACOX1Q15067 660 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 OCLNQ16625 522 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 BTBD8Q5XKL5 378 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 HAGHLQ6PII5 290 aaPredicted RBP8.32□□□□□ -1.08
NDE1-202ENST00000396355 FOXRED2Q8IWF2 684 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 ABI1Q8IZP0 508 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 RNASE11Q8TAA1 199 aaKnown RBP8.32□□□□□ -1.08
NDE1-202ENST00000396355 LGALS12Q96DT0 336 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 SNX18Q96RF0 628 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
NDE1-202ENST00000396355 PAK6Q9NQU5 681 aaPredicted RBP8.32□□□□□ -1.08
NDE1-202ENST00000396355 TRPM5Q9NZQ8 1165 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 ASB4Q9Y574 426 aa8.32□□□□□ -1.08
NDE1-202ENST00000396355 SLC15A5A6NIM6 579 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SLC30A4O14863 429 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PRPSAP2O60256 369 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 UPK1BO75841 260 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DGAT1O75907 488 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SERPINA1P01009 418 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 IFNA7P01567 189 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 APOC1P02654 83 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 CHRNGP07510 517 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 THRBP10828 461 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 FCGR1AP12314 374 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PRKACGP22612 351 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 GNA15P30679 374 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 UGT2B15P54855 530 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 KCNK10P57789 538 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 OGDHQ02218 1023 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 APOFQ13790 326 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 TMEM132BQ14DG7 1078 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 EMC2Q15006 297 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 WSCD2Q2TBF2 565 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PIWIL4Q7Z3Z4 852 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 DPPA2Q7Z7J5 298 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ADGRD2Q7Z7M1 963 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 TMEM130Q8N3G9 435 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 TMCO6Q96DC7 493 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 REXO5Q96IC2 774 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 MND1Q9BWT6 205 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 AP5M1Q9H0R1 490 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SNTG1Q9NSN8 517 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ACTR10Q9NZ32 417 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 NDUFAF4Q9P032 175 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 RBPJLQ9UBG7 517 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 TMPRSS11EQ9UL52 423 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 MEIOCA2RUB1 952 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 CYP2A6P11509 494 aaPredicted RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 M6PRP20645 277 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ERP29P30040 261 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 BMPR1AP36894 532 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PIK3CGP48736 1102 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 RPL14P50914 215 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 CUL2Q13617 745 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 STARD3Q14849 445 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 HES5Q5TA89 166 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DENND1BQ6P3S1 775 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 WDR36Q8NI36 951 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 ITFG1Q8TB96 612 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SLC9A6Q92581 669 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 CENPNQ96H22 339 aaPredicted RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 LURAP1Q96LR2 239 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 FOPNLQ96NB1 174 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PCDH9Q9HC56 1237 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SUCOQ9UBS9 1254 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 EIF2B4Q9UI10 523 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 STYXL1Q9Y6J8 313 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 NINQ8N4C6 2090 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 A0A096LPK6 155 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 A0A1B0GW55 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ZNF98A6NK75 572 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 F8VP50 259 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 YKT6O15498 198 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PAPSS1O43252 624 aaPredicted RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 CST3P01034 146 aaPredicted RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 HRGP04196 525 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L2P0CJ85 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L3P0CJ86 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L4P0CJ87 422 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L5P0CJ88 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L6P0CJ89 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4L7P0CJ90 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ERVK-10P10266 1014 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 MYL4P12829 197 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SRCP12931 536 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PRG2P13727 222 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SPNP16150 400 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 PCP4P48539 62 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DEFA6Q01524 100 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 MAB21L1Q13394 359 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 MSS51Q4VC12 460 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 SETMARQ53H47 684 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms