RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ATP5A1P25705 553 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 LSM3P62310 102 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DPYSL2Q16555 572 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF311Q5JNZ3 666 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TPGS2Q68CL5 300 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 RBM15BQ8NDT2 890 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 FAM81AQ8TBF8 368 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TNFRSF25Q93038 417 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PHF12Q96QT6 1004 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 HEPHQ9BQS7 1158 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DPEP2Q9H4A9 486 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 EVPLQ92817 2033 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SPATA31D3P0C874 917 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PSMD8P48556 350 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MASP1P48740 699 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ALDH3A2P51648 485 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DAOAP59103 153 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PITPNAQ00169 270 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 RASGEF1BQ0VAM2 473 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 LCN1P1Q5VSP4 162 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SPATA31D4Q6ZUB0 917 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 OTOP2Q7RTS6 562 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 SMG7Q92540 1137 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 C11orf24Q96F05 449 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CENPNQ96H22 339 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 IGSF9Q9P2J2 1179 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 EVLQ9UI08 416 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DHRS7Q9Y394 339 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MAP4K5Q9Y4K4 846 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 FAM240BA0A1B0GVZ2 78 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CAPN14A8MX76 684 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CBSLP0DN79 551 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 NDUFS1P28331 727 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 CBSP35520 551 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 THAP5Q7Z6K1 395 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 TAF8Q7Z7C8 310 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 AMZ2Q86W34 360 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 DQX1Q8TE96 717 aaKnown RBP5.39□□□□□ -1.55
VPS13C-204ENST00000395898 ARHGEF4Q9NR80 690 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 LGALS13Q9UHV8 139 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 MGAT4AQ9UM21 535 aa5.39□□□□□ -1.55
VPS13C-204ENST00000395898 PMM2O15305 246 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 OR1F1O43749 312 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 THRBP10828 461 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SP100P23497 879 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 DLG2Q15700 870 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CYP1B1Q16678 543 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TSTD2Q5T7W7 516 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ATG14Q6ZNE5 492 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MCEMP1Q8IX19 187 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CPNE9Q8IYJ1 553 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TTC29Q8NA56 475 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 APOLD1Q96LR9 279 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF599Q96NL3 588 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 IKZF2Q9UKS7 526 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 K7EPI3 171 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 AREL1O15033 823 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SERPINA3P01011 423 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FAM163BP0C2L3 166 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC1A5Q15758 541 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SNAP47Q5SQN1 464 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 OTOP3Q7RTS5 596 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 AKAP14Q86UN6 197 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 GPALPP1Q8IXQ4 340 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PIGXQ8TBF5 258 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C5orf34Q96MH7 638 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NUSAP1Q9BXS6 441 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 NMUR2Q9GZQ4 415 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SLC45A1Q9Y2W3 748 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 OAS3Q9Y6K5 1087 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 OR2AG2A6NM03 316 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RHPN2P1A8MT19 583 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CHP2O43745 196 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PPP2R2BQ00005 443 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ZMYND11Q15326 602 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 REP15Q6BDI9 236 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PRR23CQ6ZRP0 262 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CRYBG2Q8N1P7 616 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FCGR1BQ92637 280 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PSMG2Q969U7 264 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MFSD3Q96ES6 412 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FCRL4Q96PJ5 515 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MIPEPQ99797 713 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 ZSCAN5AQ9BUG6 496 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SDCBP2Q9H190 292 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 TAS2R7Q9NYW3 318 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CCDC59Q9P031 241 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHAC2Q9Y5I4 1007 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CROCCQ5TZA2 2017 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 FFAR2O15552 330 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 MT-CYBP00156 380 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C9P02748 559 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 RPS9P46781 194 aaKnown RBP5.38□□□□□ -1.55
VPS13C-204ENST00000395898 CLCN7P51798 805 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 C1QTNF8P60827 252 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 DGKZQ13574 1117 aa5.38□□□□□ -1.55
VPS13C-204ENST00000395898 SPIN4Q56A73 249 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms