RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TK2O00142 265 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 KLF11O14901 512 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 SLC16A5O15375 505 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ZBTB14O43829 449 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 LILRB5O75023 590 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 ENO2P09104 434 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 HIST1H2AGP0C0S8 130 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 HIST1H2ADP20671 130 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 GRK2P25098 689 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 PGGT1BP53609 377 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 IRX4P78413 519 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 WDR45BQ5MNZ6 344 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ZYG11AQ6WRX3 759 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 IQCHQ86VS3 1027 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 OXR1Q8N573 874 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 LKAAEAR1Q8TD35 194 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 HIST1H2AHQ96KK5 128 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 BMFQ96LC9 184 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 HIST1H2AJQ99878 128 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 TIMM29Q9BSF4 260 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 H2AFJQ9BTM1 129 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 MANSC1Q9H8J5 431 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ACSL5Q9ULC5 683 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 SNX2O60749 519 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 TRIM13O60858 407 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 S100BP04271 92 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 CEACAM5P06731 702 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 CLDN2P57739 230 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 LRP8Q14114 963 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 GBX1Q14549 363 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ZSCAN26Q16670 478 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 LIPMQ5VYY2 423 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ENPP7Q6UWV6 458 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 GCNT7Q6ZNI0 430 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 Q6ZSR6 202 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 WDR5BQ86VZ2 330 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 ZNF547Q8IVP9 402 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 CFAP206Q8IYR0 622 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 SCARF2Q96GP6 870 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
VAPB-202ENST00000395802 OXSMQ9NWU1 459 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 FBXO4Q9UKT5 387 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 SLC5A10A0PJK1 596 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 WDR91A4D1P6 747 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 H3BM21 787 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 IPO13O94829 963 aaKnown RBP13.42□□□□□ -0.26
VAPB-202ENST00000395802 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
VAPB-202ENST00000395802 CYP2A7P20853 494 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 MAP4P27816 1152 aaKnown RBP13.42□□□□□ -0.26
VAPB-202ENST00000395802 BLKP51451 505 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
VAPB-202ENST00000395802 NFKB2Q00653 900 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 DMPKQ09013 629 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 CDKL4Q5MAI5 379 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 LPCAT2Q7L5N7 544 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 BMP8AQ7Z5Y6 402 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 CPLX4Q7Z7G2 160 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 GPSM1Q86YR5 675 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 SLC22A15Q8IZD6 547 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 TMEM151AQ8N4L1 468 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 MFSD2AQ8NA29 543 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 MAGEC3Q8TD91 643 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 NAT14Q8WUY8 206 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 KLHDC7BQ96G42 594 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 COG4Q9H9E3 785 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 RDH14Q9HBH5 336 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 AASDHPPTQ9NRN7 309 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 FGFR1OP2Q9NVK5 253 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 KLQ9UEF7 1012 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 MBD1Q9UIS9 605 aaPredicted RBP13.42□□□□□ -0.26
VAPB-202ENST00000395802 MOSPD1Q9UJG1 213 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 BDP1A6H8Y1 2624 aa13.42□□□□□ -0.26
VAPB-202ENST00000395802 PRSS38A1L453 326 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 G3V2L1 256 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 RPN2P04844 631 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 GFAPP14136 432 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 KCNA4P22459 653 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 CNR2P34972 360 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 SERPINB5P36952 375 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 GMPRP36959 345 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 DNAJB13P59910 316 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 DMTNQ08495 405 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 PCLAFQ15004 111 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TSNQ15631 228 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 PYCR3Q53H96 274 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 FOXR1Q6PIV2 292 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 PIWIL4Q7Z3Z4 852 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 C10orf107Q8IVU9 208 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms