RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DCBLD1Q8N8Z6 715 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 FBXO25Q8TCJ0 367 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 LKAAEAR1Q8TD35 194 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CFAP36Q96G28 342 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 SLC38A3Q99624 504 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 PHACTR1Q9C0D0 580 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 P2RY12Q9H244 342 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 NEUROG3Q9Y4Z2 214 aa16.21■□□□□ 0.19
CXCL1-201ENST00000395761 CFAP20Q9Y6A4 193 aaKnown RBP16.21■□□□□ 0.19
CXCL1-201ENST00000395761 KLHL33A6NCF5 533 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 E7ESA3 106 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 S1PR4O95977 384 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 VIPP01282 170 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 ERVK-10P10266 1014 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 OGNP20774 298 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 MCM3P25205 808 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 ECHS1P30084 290 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 FMO4P31512 558 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 HALP42357 657 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 PREPP48147 710 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 THOC5Q13769 683 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 SPIDRQ14159 915 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 FASTKD3Q14CZ7 662 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 BRD3Q15059 726 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 HSP90AA5PQ58FG0 334 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 SPANXN3Q5MJ09 141 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 ZNF470Q6ECI4 717 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 CAPRIN2Q6IMN6 1127 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 UNC5AQ6ZN44 842 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 USP53Q70EK8 1073 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 CILP2Q8IUL8 1156 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 IFT81Q8WYA0 676 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 ELMO1Q92556 727 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 LPGAT1Q92604 370 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 RMDN2Q96LZ7 410 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 BIRC8Q96P09 236 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 GFM1Q96RP9 751 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 NAT9Q9BTE0 207 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 TSPYL1Q9H0U9 437 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 OR52A5Q9H2C5 316 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 VPS37BQ9H9H4 285 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 KCNK4Q9NYG8 393 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 ZC3H7BQ9UGR2 993 aaKnown RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 RAB21Q9UL25 225 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 MSRB2Q9Y3D2 182 aa16.2■□□□□ 0.18
CXCL1-201ENST00000395761 V9GYY5 206 aaPredicted RBP16.2■□□□□ 0.18
CXCL1-201ENST00000395761 IGHV1OR21-1A0A087WYE8 117 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 UBA6A0AVT1 1052 aaPredicted RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 QSOX1O00391 747 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CSO75390 466 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 TTC4O95801 387 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 FTH1P02794 183 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 RPS3P23396 243 aaKnown RBP eCLIP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CD1CP29017 333 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CCR7P32248 378 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 GPR3P46089 330 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 PDX1P52945 283 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 EIF3BP55884 814 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CFHR1Q03591 330 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CTSL3PQ5NE16 218 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 DUS1LQ6P1R4 473 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 RBM44Q6ZP01 1051 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 TMPRSS9Q7Z410 1059 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 KCNMB4Q86W47 210 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 TRIM48Q8IWZ4 208 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CACTIN-AS1Q8N1I8 211 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 WDR48Q8TAF3 677 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 SH3KBP1Q96B97 665 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 LRRC39Q96DD0 335 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CXorf40BQ96DE9 158 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 TCF12Q99081 682 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 TBC1D10AQ9BXI6 508 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 PARD6BQ9BYG5 372 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 RDH14Q9HBH5 336 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 FBXO6Q9NRD1 293 aaPredicted RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 IARS2Q9NSE4 1012 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 IMP3Q9NV31 184 aaKnown RBP16.19■□□□□ 0.18
CXCL1-201ENST00000395761 CRYL1Q9Y2S2 319 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 PCDHB1Q9Y5F3 818 aa16.19■□□□□ 0.18
CXCL1-201ENST00000395761 AKAP13Q12802 2813 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 CEP295Q9C0D2 2601 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 SLC5A10A0PJK1 596 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 TCEA3O75764 348 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 GSTM1P09488 218 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 SLC35G4P0C7Q5 338 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 MTHFD1P11586 935 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 SLC1A2P43004 574 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 CSE1LP55060 971 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 MPP1Q00013 466 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 GSTM4Q03013 218 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 CAMK2BQ13554 666 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 BOP1Q14137 746 aaKnown RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 NAA30Q147X3 362 aaPredicted RBP16.18■□□□□ 0.18
CXCL1-201ENST00000395761 ISXQ2M1V0 245 aa16.18■□□□□ 0.18
CXCL1-201ENST00000395761 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms