RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 STN1Q9H668 368 aaKnown RBP19.5■□□□□ 0.71
SNCA-203ENST00000394986 SAYSD1Q9NPB0 183 aa19.5■□□□□ 0.71
SNCA-203ENST00000394986 IMP3Q9NV31 184 aaKnown RBP19.5■□□□□ 0.71
SNCA-203ENST00000394986 ACSL5Q9ULC5 683 aa19.5■□□□□ 0.71
SNCA-203ENST00000394986 ZFC3H1O60293 1989 aaKnown RBP19.49■□□□□ 0.71
SNCA-203ENST00000394986 NTN3O00634 580 aaPredicted RBP19.49■□□□□ 0.71
SNCA-203ENST00000394986 S1PR4O95977 384 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 VIPP01282 170 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 JUPP14923 745 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 FMO4P31512 558 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 MPP1Q00013 466 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 SPIDRQ14159 915 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 STEAP4Q687X5 459 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 TRMT10BQ6PF06 316 aaKnown RBP19.49■□□□□ 0.71
SNCA-203ENST00000394986 CAPN12Q6ZSI9 719 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 TMPRSS12Q86WS5 348 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 GALNT15Q8N3T1 639 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 CERS2Q96G23 380 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 BIRC8Q96P09 236 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 GFM1Q96RP9 751 aaKnown RBP19.49■□□□□ 0.71
SNCA-203ENST00000394986 SLC38A3Q99624 504 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 TBC1D10AQ9BXI6 508 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 KCNK4Q9NYG8 393 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 GNPTGQ9UJJ9 305 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 ANGPTL2Q9UKU9 493 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 CLCA2Q9UQC9 943 aa19.49■□□□□ 0.71
SNCA-203ENST00000394986 RPS3P23396 243 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNCA-203ENST00000394986 CCR7P32248 378 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 PDX1P52945 283 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 TARDBPQ13148 414 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNCA-203ENST00000394986 SYTL3Q4VX76 610 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 RNF187Q5TA31 235 aaPredicted RBP19.48■□□□□ 0.71
SNCA-203ENST00000394986 TMPRSS9Q7Z410 1059 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 CCDC25Q86WR0 208 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 SPNS2Q8IVW8 549 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 JPH3Q8WXH2 748 aaPredicted RBP19.48■□□□□ 0.71
SNCA-203ENST00000394986 SEC14L1Q92503 715 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 FAM136AQ96C01 138 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 TCF12Q99081 682 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 FAM167BQ9BTA0 163 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 OR52A5Q9H2C5 316 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 RDH14Q9HBH5 336 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 EPB41L5Q9HCM4 733 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 POT1Q9NUX5 634 aa19.48■□□□□ 0.71
SNCA-203ENST00000394986 RP1P56715 2156 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 IGHV1OR21-1A0A087WYE8 117 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 BHMG1C9JSJ3 638 aaPredicted RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 D6RAR5 112 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 LIN7AO14910 233 aaPredicted RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 NIPSNAP2O75323 286 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 MTHFD1P11586 935 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 ABCG1P45844 678 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 MAPK9P45984 424 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 GPR3P46089 330 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 CARSP49589 748 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 CAV1Q03135 178 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 GPR18Q14330 331 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 CAPRIN2Q6IMN6 1127 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 RBM44Q6ZP01 1051 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 USP53Q70EK8 1073 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 B3GNT8Q7Z7M8 397 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 LRRC6Q86X45 466 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 DCBLD1Q8N8Z6 715 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 CALML6Q8TD86 181 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 NUDT22Q9BRQ3 303 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 CEP295Q9C0D2 2601 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 SLC40A1Q9NP59 571 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 PPANQ9NQ55 473 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 INTS10Q9NVR2 710 aaKnown RBP19.47■□□□□ 0.71
SNCA-203ENST00000394986 FBXO5Q9UKT4 447 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 NEUROG3Q9Y4Z2 214 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 PCDHB1Q9Y5F3 818 aa19.47■□□□□ 0.71
SNCA-203ENST00000394986 SLC5A10A0PJK1 596 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 PFDN6O15212 129 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 CSO75390 466 aaKnown RBP19.46■□□□□ 0.71
SNCA-203ENST00000394986 GSTM1P09488 218 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 CD1CP29017 333 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 CSF2RBP32927 897 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 PPM1FP49593 454 aaPredicted RBP19.46■□□□□ 0.71
SNCA-203ENST00000394986 SHC2P98077 582 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 GSTM4Q03013 218 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 HSPA14Q0VDF9 509 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 CBLBQ13191 982 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 ZNF549Q6P9A3 640 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 CNSTQ6PJW8 725 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 TMEM26Q6ZUK4 368 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 VRK3Q8IV63 474 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 FOXP3Q9BZS1 431 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 ZDHHC18Q9NUE0 388 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 GALPQ9UBC7 116 aa19.46■□□□□ 0.71
SNCA-203ENST00000394986 ZNF500O60304 480 aaPredicted RBP19.45■□□□□ 0.7
SNCA-203ENST00000394986 TCEA3O75764 348 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 HAUS5O94927 633 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 CFHR1Q03591 330 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 RPA4Q13156 261 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 MAP9Q49MG5 647 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 CCNI2Q6ZMN8 369 aaPredicted RBP19.45■□□□□ 0.7
SNCA-203ENST00000394986 PDZD3Q86UT5 571 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 LMNTD2Q8IXW0 634 aa19.45■□□□□ 0.7
SNCA-203ENST00000394986 AVL9Q8NBF6 648 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms