RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 FAM8A1Q9UBU6 413 aa8.65□□□□□ -1.02
ATG4A-205ENST00000394892 SLC2A6Q9UGQ3 507 aa8.65□□□□□ -1.02
ATG4A-205ENST00000394892 AAR2Q9Y312 384 aaKnown RBP8.65□□□□□ -1.02
ATG4A-205ENST00000394892 MRPS18BQ9Y676 258 aaKnown RBP8.65□□□□□ -1.02
ATG4A-205ENST00000394892 TLN1Q9Y490 2541 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SPENQ96T58 3664 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 OR5K3A6NET4 321 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 POLBP06746 335 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 FURINP09958 794 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ZSCAN5DPP0CG00 497 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 AMD1P17707 334 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 NELFEP18615 380 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 AKT1P31749 480 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 FOXN2P32314 431 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 RAB15P59190 212 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 TLE1Q04724 770 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 PRPSAP1Q14558 356 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 POU6F1Q14863 301 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 PRAMEF17Q5VTA0 474 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 CACHD1Q5VU97 1274 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 IRGCQ6NXR0 463 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 NAPRTQ6XQN6 538 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ARHGEF18Q6ZSZ5 1173 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF534Q76KX8 674 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SNX20Q7Z614 316 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SLC13A5Q86YT5 568 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 TRIM48Q8IWZ4 208 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 RBM12BQ8IXT5 1001 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 CFAP206Q8IYR0 622 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 RNF10Q8N5U6 811 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 UBL4BQ8N7F7 174 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 AVL9Q8NBF6 648 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 CCDC112Q8NEF3 446 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 OR13J1Q8NGT2 312 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ELMO2Q96JJ3 720 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SLC45A3Q96JT2 553 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 TTC25Q96NG3 672 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 C19orf43Q9BQ61 176 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 STN1Q9H668 368 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ETNK1Q9HBU6 452 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 IMP3Q9NV31 184 aaKnown RBP8.64□□□□□ -1.03
ATG4A-205ENST00000394892 ZDHHC3Q9NYG2 299 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SLC24A2Q9UI40 661 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
ATG4A-205ENST00000394892 SPTA1P02549 2419 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 HECTD1Q9ULT8 2610 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CCDC162PA2VCL2 907 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 GOLGA6L3A6NEY3 463 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 BTN3A3O00478 584 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 POLR1CO15160 346 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 TOX3O15405 576 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 OR1I1O60431 355 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SPAG6O75602 509 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SUN1O94901 812 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CRTAMO95727 393 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 EBLN1P0CF75 366 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 FGF5P12034 268 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ATP1B2P14415 290 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 VCLP18206 1134 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ACRV1P26436 265 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 OAS2P29728 719 aaKnown RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 STAT5AP42229 794 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 PREPP48147 710 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 PPM1FP49593 454 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 KPNA2P52292 529 aaKnown RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CCZ1BP86790 482 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CCZ1P86791 482 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 FOXM1Q08050 763 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SNX1Q13596 522 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 LAMB3Q13751 1172 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SEMA3AQ14563 771 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 LCN10Q6JVE6 187 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 PWWP2BQ6NUJ5 590 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 CEACAM20Q6UY09 585 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SPNS2Q8IVW8 549 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SYCE1Q8N0S2 351 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 NLGN4XQ8N0W4 816 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 IL22RA1Q8N6P7 574 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 SLC38A9Q8NBW4 561 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 GALNT6Q8NCL4 622 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 PHC3Q8NDX5 983 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 NLGN4YQ8NFZ3 816 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 HM13Q8TCT9 377 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ZNF514Q96K75 400 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 C12orf66Q96MD2 445 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 TEFMQ96QE5 360 aaKnown RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 OR6C1Q96RD1 312 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 COPS8Q99627 209 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 TLR10Q9BXR5 811 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ZCCHC2Q9C0B9 1178 aaKnown RBP8.63□□□□□ -1.03
ATG4A-205ENST00000394892 TWSG1Q9GZX9 223 aa8.63□□□□□ -1.03
ATG4A-205ENST00000394892 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms