RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HPCAL1P37235 193 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CAPGP40121 348 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 HK2P52789 917 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 GPX6P59796 221 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 MCCD1P59942 119 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 ZNF267Q14586 743 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 C5orf22Q49AR2 442 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RAB41Q5JT25 222 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PPP4R4Q6NUP7 873 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RHBDF2Q6PJF5 856 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 AFTPHQ6ULP2 937 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RFPL4BQ6ZWI9 263 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 P2RY8Q86VZ1 359 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ZDHHC14Q8IZN3 488 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PGBD3Q8N328 593 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 POF1BQ8WVV4 589 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SUSD6Q92537 303 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 MAELQ96JY0 434 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ELOVL6Q9H5J4 265 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ITM2CQ9NQX7 267 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TLR9Q9NR96 1032 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TMEM248Q9NWD8 314 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ANKMY1Q9P2S6 941 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RAI2Q9Y5P3 530 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ANKRD12Q6UB98 2062 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TCRBV5S1A1TA0A578 114 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 A8MX80 341 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 H0YC42 278 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 KPNA3O00505 521 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 DCLK1O15075 740 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 NRP2O60462 931 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 NDUFS2O75306 463 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 IFNA16P05015 189 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SNRPB2P08579 225 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 NAT2P11245 290 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SLC26A3P40879 764 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CCT8P50990 548 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 POU4F1Q01851 419 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SLC10A2Q12908 348 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 RAB33AQ14088 237 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 EML3Q32P44 896 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FAM98BQ52LJ0 330 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 COLEC12Q5KU26 742 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FAM45BPQ6NSW5 357 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PLEKHG7Q6ZR37 379 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FKBP9P1Q75LS8 142 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 KBTBD6Q86V97 674 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SLC41A1Q8IVJ1 513 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 NAT16Q8N8M0 369 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 OR2T34Q8NGX1 318 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 OR2T3Q8NH03 318 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 OR4L1Q8NH43 312 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FAM45AQ8TCE6 357 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ASZ1Q8WWH4 475 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FAM162AQ96A26 154 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 MFSD3Q96ES6 412 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TSGA13Q96PP4 275 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RHOJQ9H4E5 214 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RPF2Q9H7B2 306 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 CYP4F12Q9HCS2 524 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CD320Q9NPF0 282 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ING3Q9NXR8 418 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PCDH10Q9P2E7 1040 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 MKL2Q9ULH7 1088 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TCAF1Q9Y4C2 921 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 GOLGA4Q13439 2230 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 ZNF840PA6NDX5 716 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 EI24O14681 340 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CD3EAPO15446 510 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 NUAK1O60285 661 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 B3GALNT1O75752 331 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RNASEH2AO75792 299 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 MT-ND1P03886 318 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DDX6P26196 483 aaKnown RBP eCLIP5.61□□□□□ -1.51
RFFL-202ENST00000394597 OPRL1P41146 370 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 HTR2BP41595 481 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 GRIA1P42261 906 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TTPAP49638 278 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TMBIM6P55061 237 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RAB10P61026 200 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CDKL1Q00532 357 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TNK2Q07912 1038 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SCRN3Q0VDG4 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PMS2P3Q13401 168 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 GRM3Q14832 879 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 QPRTQ15274 297 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 KIAA0319Q5VV43 1072 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SULT1C3Q6IMI6 304 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SYCE2Q6PIF2 218 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 LINGO4Q6UY18 593 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 GK5Q6ZS86 529 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 THAP5Q7Z6K1 395 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SCD5Q86SK9 330 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DCP2Q8IU60 420 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 SPPL2CQ8IUH8 684 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 GRAMD2AQ8IUY3 354 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TBC1D21Q8IYX1 336 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SETD9Q8NE22 299 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CSGALNACT1Q8TDX6 532 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms