RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 STARD3Q14849 445 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 RAB41Q5JT25 222 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 CADM2Q8N3J6 435 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 MCOLN3Q8TDD5 553 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 ZFP42Q96MM3 310 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 COLEC11Q9BWP8 271 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 DCSTAMPQ9H295 470 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 SDR39U1Q9NRG7 319 aaPredicted RBP18.61■□□□□ 0.57
HOXC6-202ENST00000394331 TPRKBQ9Y3C4 175 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 DNAJB2P25686 324 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PIGAP37287 484 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 TPRG1LQ5T0D9 272 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 BLOC1S3Q6QNY0 202 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 NOXA1Q86UR1 476 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 GATAD2AQ86YP4 633 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SEPHS2Q99611 448 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 OMDQ99983 421 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 CCDC59Q9P031 241 aaKnown RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 A0A0G2JMP0 313 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 LOC100130705A0A1B0GUX0 176 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 EFCAB9A8MZ26 197 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PTGES3LE9PB15 166 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PRKD3O94806 890 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 LRIG2O94898 1065 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SEMA3DO95025 777 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 MED26O95402 600 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 F7P08709 466 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 CHRM3P20309 590 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 CYP2A7P20853 494 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SLC35A2P78381 396 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 KCNAB2Q13303 367 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 CDK5R2Q13319 367 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 LIX1LQ8IVB5 337 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SLC41A1Q8IVJ1 513 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 NPWQ8N729 165 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 CCDC32Q9BV29 185 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 WDCPQ9H6R7 721 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 ZFP14Q9HCL3 533 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 C3orf18Q9UK00 162 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PNMA8CA0A1B0GUJ8 204 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SNTNA6NMZ2 147 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 I6L893 689 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 USP17L7P0C7H9 530 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 NCK1P16333 377 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 TGFBR2P37173 567 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 SLC22A9Q8IVM8 553 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 OR5H6Q8NGV6 325 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PIK3R3Q92569 461 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 PCED1BQ96HM7 432 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 NSMCE2Q96MF7 247 aa18.6■□□□□ 0.57
HOXC6-202ENST00000394331 MLPHQ9BV36 600 aaPredicted RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 FBRSL1Q9HCM7 1045 aaKnown RBP18.6■□□□□ 0.57
HOXC6-202ENST00000394331 UTRNP46939 3433 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 hCG_2039718K7EN88 272 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 PSMD3O43242 534 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 RFX4Q33E94 735 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 TECRLQ5HYJ1 363 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 LYPD8Q6UX82 237 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 SLC22A15Q8IZD6 547 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 TEKT5Q96M29 485 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 CCNB1IP1Q9NPC3 277 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 RAPGEFL1Q9UHV5 662 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 DNMT3LQ9UJW3 386 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 CDH9Q9ULB4 789 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 PCDHGB6Q9Y5F9 930 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 HSPE1-MOB4S4R3N1 261 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 A0A1W2PP18 115 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 MYBPHLA2RUH7 354 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 A8MT66 165 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 LOC110117498-PIK3R3F6TDL0 507 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 NPPAP01160 153 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 MT-ND1P03886 318 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 NFKB1P19838 968 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 AVPR1AP37288 418 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 EIF2B5Q13144 721 aaKnown RBP18.59■□□□□ 0.57
HOXC6-202ENST00000394331 FAM83EQ2M2I3 478 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 FAM98BQ52LJ0 330 aaKnown RBP18.59■□□□□ 0.57
HOXC6-202ENST00000394331 CERCAMQ5T4B2 595 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 NAPEPLDQ6IQ20 393 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 CES5AQ6NT32 575 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 AMER2Q8N7J2 671 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 ZMIZ2Q8NF64 920 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 ZFYVE19Q96K21 471 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 GAD1Q99259 594 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 AP5M1Q9H0R1 490 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 AKTIPQ9H8T0 292 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 DNAJB9Q9UBS3 223 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 OR12D3Q9UGF7 316 aa18.59■□□□□ 0.57
HOXC6-202ENST00000394331 ZBBXA8MT70 800 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 ITGA2P17301 1181 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 GTF2E2P29084 291 aaKnown RBP18.58■□□□□ 0.57
HOXC6-202ENST00000394331 HTR2BP41595 481 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 RPS5P46782 204 aaKnown RBP18.58■□□□□ 0.57
HOXC6-202ENST00000394331 CXCR3P49682 368 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 GRIK2Q13002 908 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.57
HOXC6-202ENST00000394331 NAT16Q8N8M0 369 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms