RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TRAF3Q13114 568 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 MILR1Q7Z6M3 343 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SPATA24Q86W54 205 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 LILRA2Q8N149 483 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 FNDC5Q8NAU1 212 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 PDPRQ8NCN5 879 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SMG7Q92540 1137 aaKnown RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 NXPE3Q969Y0 559 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 ECSITQ9BQ95 431 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 EBF3Q9H4W6 596 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 COPS7BQ9H9Q2 264 aaPredicted RBP14.81□□□□□ -0.04
GPC3-202ENST00000394299 WWOXQ9NZC7 414 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SUN2Q9UH99 717 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 SARDHQ9UL12 918 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 ST14Q9Y5Y6 855 aa14.81□□□□□ -0.04
GPC3-202ENST00000394299 WASH3PC4AMC7 463 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 SYNCRIPO60506 623 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 CHEK2O96017 543 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 HNRNPA1P09651 372 aaKnown RBP eCLIP14.8□□□□□ -0.042e-6■■□□□ 12.9
GPC3-202ENST00000394299 HLA-EP13747 358 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 AKT1P31749 480 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 DGKGP49619 791 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 BOP1Q14137 746 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 GRIN2CQ14957 1233 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 SGO1Q5FBB7 561 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 C8orf82Q6P1X6 216 aaPredicted RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 ADGRG6Q86SQ4 1221 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 PHOSPHO2Q8TCD6 241 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 MTFMTQ96DP5 389 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 ZNHIT2Q9UHR6 403 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 RNF11Q9Y3C5 154 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 ALPK3Q96L96 1907 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 ASPDHA6ND91 283 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 PRRT4C9JH25 899 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 PLK4O00444 970 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 VCLP18206 1134 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 HOXA9P31269 272 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 TRIM25Q14258 630 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 PAGE3Q5JUK9 113 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 BLOC1S3Q6QNY0 202 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 FOXJ1Q92949 421 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 RIOK2Q9BVS4 552 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 NUSAP1Q9BXS6 441 aaKnown RBP14.8□□□□□ -0.04
GPC3-202ENST00000394299 CD244Q9BZW8 370 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 FAM83DQ9H4H8 585 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 SPAG4Q9NPE6 437 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 AIG1Q9NVV5 245 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 TMEM181Q9P2C4 612 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 CD300AQ9UGN4 299 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 AK5Q9Y6K8 562 aa14.8□□□□□ -0.04
GPC3-202ENST00000394299 TMEM202A6NGA9 273 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 FADS2P1A8MWK0 482 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 LOC730098B7Z3J9 87 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 C5orf67F2Z3F1 127 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 TULP3O75386 442 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 IDO1P14902 403 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 CASP2P42575 452 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 AQP4P55087 323 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 POLR2LP62875 67 aaKnown RBP14.79□□□□□ -0.04
GPC3-202ENST00000394299 RFTN2Q52LD8 501 aaPredicted RBP14.79□□□□□ -0.04
GPC3-202ENST00000394299 FAM110BQ8TC76 370 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 PYCR2Q96C36 320 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 KCTD5Q9NXV2 234 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 IL36AQ9UHA7 158 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 CIDEBQ9UHD4 219 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 PSMD13Q9UNM6 376 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 PDE10AQ9Y233 779 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 NDUFAF1Q9Y375 327 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 ANGPTL3Q9Y5C1 460 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 TNPO3Q9Y5L0 923 aaKnown RBP14.79□□□□□ -0.04
GPC3-202ENST00000394299 PLXNB3Q9ULL4 1909 aa14.79□□□□□ -0.04
GPC3-202ENST00000394299 FXYD1O00168 92 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 NME4O00746 187 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 ANGPT2O15123 496 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 ADH5P11766 374 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 ATP1B2P14415 290 aaPredicted RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 AOAHP28039 575 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 NNMTP40261 264 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 RPIAP49247 311 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 HMGCS1Q01581 520 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 UBE3AQ05086 875 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 GPM6BQ13491 265 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 DMC1Q14565 340 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 OGFOD2Q6N063 350 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PQLC1Q8N2U9 271 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 SPDL1Q96EA4 605 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PKP2Q99959 881 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 C19orf43Q9BQ61 176 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 OPTCQ9UBM4 332 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 FBXO10Q9UK96 956 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 TMCO1Q9UM00 188 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 COQ6Q9Y2Z9 468 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 IGLV3-16A0A075B6K0 115 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 C16orf96A6NNT2 1141 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 SGTAO43765 313 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 RSL1D1O76021 490 aaKnown RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 MATN4O95460 622 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms