RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PGRMC1O00264 195 aaKnown RBP30.04■■■□□ 2.4
CMTM4-202ENST00000394106 TSPAN7P41732 249 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 NSG1P42857 185 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 PRAMEP78395 509 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 CRADDP78560 199 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 ITIH4Q14624 930 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 PCID2Q5JVF3 399 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 IRGCQ6NXR0 463 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 COG1Q8WTW3 980 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 OSBPL9Q96SU4 736 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 NAP1L3Q99457 506 aaPredicted RBP30.04■■■□□ 2.4
CMTM4-202ENST00000394106 CHRAC1Q9NRG0 131 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 B3GALT1Q9Y5Z6 326 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 PRSS21Q9Y6M0 314 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 PTPRQQ9UMZ3 2332 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 RASSF9O75901 435 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 AP2A2O94973 939 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 CD82P27701 267 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 ACVR1Q04771 509 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 GPS1Q13098 491 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 KRT33BQ14525 404 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 ARHGAP40Q5TG30 622 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 ANKS6Q68DC2 871 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 FAM92BQ6ZTR7 304 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 GPR155Q7Z3F1 870 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 BMPERQ8N8U9 685 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 OR4L1Q8NH43 312 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 DDA1Q9BW61 102 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 PCDHGA3Q9Y5H0 932 aa30.03■■■□□ 2.4
CMTM4-202ENST00000394106 KRT14P02533 472 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 ANKRD34CP0C6C1 535 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 RAB15P59190 212 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 DCAF12Q5T6F0 453 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 LYPLAL1Q5VWZ2 237 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 CAPRIN2Q6IMN6 1127 aaKnown RBP30.02■■■□□ 2.4
CMTM4-202ENST00000394106 ZDHHC12Q96GR4 267 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 TTC1Q99614 292 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 CTRCQ99895 268 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 BFARQ9NZS9 450 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 SSUH2Q9Y2M2 353 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 PCDHB11Q9Y5F2 797 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 PIKFYVEQ9Y2I7 2098 aa30.02■■■□□ 2.4
CMTM4-202ENST00000394106 TCRBV7S3A2A0A539 114 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 AP3B1O00203 1094 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 KIF1CO43896 1103 aaKnown RBP30.01■■■□□ 2.39
CMTM4-202ENST00000394106 TPSB2P20231 275 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 PREPP48147 710 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 NPY2RP49146 381 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 SEPHS1P49903 392 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 MC2RQ01718 297 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 TPSAB1Q15661 275 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 FASTKD1Q53R41 847 aaKnown RBP30.01■■■□□ 2.39
CMTM4-202ENST00000394106 ZNF449Q6P9G9 518 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 KLHL35Q6PF15 583 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 PACS1Q6VY07 963 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 ZNF534Q76KX8 674 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 PEX13Q92968 403 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 PDLIM2Q96JY6 352 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 CCNL2Q96S94 520 aaPredicted RBP30.01■■■□□ 2.39
CMTM4-202ENST00000394106 ASPSCR1Q9BZE9 553 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 IL22Q9GZX6 179 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 SLC24A2Q9UI40 661 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 HEBP2Q9Y5Z4 205 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 COLEC10Q9Y6Z7 277 aa30.01■■■□□ 2.39
CMTM4-202ENST00000394106 USP27XA6NNY8 438 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 STMND1H3BQB6 276 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 OR1I1O60431 355 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 MGAT1P26572 445 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 COILP38432 576 aaPredicted RBP30■■■□□ 2.39
CMTM4-202ENST00000394106 PPP1CAP62136 330 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 VAC14Q08AM6 782 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 ZNF658BQ4V348 819 aaPredicted RBP30■■■□□ 2.39
CMTM4-202ENST00000394106 CACHD1Q5VU97 1274 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 CCDC81Q6ZN84 652 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 OR52A5Q9H2C5 316 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 KIR3DX1Q9H7L2 352 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 EPHA6Q9UF33 1036 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 SNX12Q9UMY4 172 aa30■■■□□ 2.39
CMTM4-202ENST00000394106 SDK2Q58EX2 2172 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 QSOX1O00391 747 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 IFRD1O00458 451 aaPredicted RBP29.99■■■□□ 2.39
CMTM4-202ENST00000394106 GSTM1P09488 218 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 PDHA2P29803 388 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 CDK16Q00536 496 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 GSTM4Q03013 218 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 SEMA3AQ14563 771 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 LRRC8BQ6P9F7 803 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 CCDC137Q6PK04 289 aaKnown RBP29.99■■■□□ 2.39
CMTM4-202ENST00000394106 CERS6Q6ZMG9 384 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 ACTRT1Q8TDG2 376 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 ZFPM2Q8WW38 1151 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 ELMO1Q92556 727 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 FERD3LQ96RJ6 166 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 APMAPQ9HDC9 416 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 SYBUQ9NX95 663 aa29.99■■■□□ 2.39
CMTM4-202ENST00000394106 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.98■■■□□ 2.39
CMTM4-202ENST00000394106 ZNF185O15231 689 aa29.98■■■□□ 2.39
CMTM4-202ENST00000394106 TOX3O15405 576 aaPredicted RBP29.98■■■□□ 2.39
CMTM4-202ENST00000394106 FTH1P02794 183 aa29.98■■■□□ 2.39
CMTM4-202ENST00000394106 SRSF6Q13247 344 aaKnown RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms