RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 C12orf66Q96MD2 445 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 TMEM74Q96NL1 305 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 INSM2Q96T92 566 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 DPYSL5Q9BPU6 564 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 P2RY12Q9H244 342 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 EPB41L5Q9HCM4 733 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 SLC40A1Q9NP59 571 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 IMP3Q9NV31 184 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 IL1RAPL1Q9NZN1 696 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 GNPTGQ9UJJ9 305 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 HEBP2Q9Y5Z4 205 aa18.59■□□□□ 0.57
PDLIM7-204ENST00000393546 SPEGQ15772 3267 aa18.58■□□□□ 0.57
PDLIM7-204ENST00000393546 CTAGE15A4D2H0 777 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 TRABD2BA6NFA1 517 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 LILRA5A6NI73 299 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 IFRD1O00458 451 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CTAGE8P0CG41 777 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 MTHFD1P11586 935 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 ITGB6P18564 788 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 RPS3P23396 243 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 INHBCP55103 352 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CAV1Q03135 178 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CAMK2BQ13554 666 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 KRT33BQ14525 404 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CRYMQ14894 314 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 MAP9Q49MG5 647 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 SYTL3Q4VX76 610 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 HP1BP3Q5SSJ5 553 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 NKAIN2Q5VXU1 208 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 XKR5Q6UX68 686 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CTAGE6Q86UF2 777 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CILP2Q8IUL8 1156 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 IGDCC3Q8IVU1 814 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CTAGE4Q8IX94 777 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 PANX3Q96QZ0 392 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 LRRC1Q9BTT6 524 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 TBC1D10AQ9BXI6 508 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 EPB41L1Q9H4G0 881 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 INTS10Q9NVR2 710 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 ZC3H7BQ9UGR2 993 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 CHMP2BQ9UQN3 213 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 PCDHB1Q9Y5F3 818 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 TEX264Q9Y6I9 313 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 COLEC10Q9Y6Z7 277 aa18.58■□□□□ 0.56
PDLIM7-204ENST00000393546 H3BMM5 538 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 DUX1O43812 170 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 NDUFS1P28331 727 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 PDHA2P29803 388 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 FMO4P31512 558 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 CD151P48509 253 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 EIF3BP55884 814 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 PDIA2Q13087 525 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 BRD3Q15059 726 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 HSP90AA5PQ58FG0 334 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 ZNF470Q6ECI4 717 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 CENPUQ71F23 418 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 KCNMB4Q86W47 210 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 MMGT1Q8N4V1 131 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 SPDYE1Q8NFV5 336 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 ZFPM2Q8WW38 1151 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 LPGAT1Q92604 370 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 GATA6Q92908 595 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 TMEM159Q96B96 161 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 CFAP36Q96G28 342 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 RMDN2Q96LZ7 410 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 FAM167BQ9BTA0 163 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 STRADBQ9C0K7 418 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 ZMYND15Q9H091 742 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 OR52A5Q9H2C5 316 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 RDH14Q9HBH5 336 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 GRHL1Q9NZI5 618 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 CRYL1Q9Y2S2 319 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 ENTPD2Q9Y5L3 495 aa18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 CFAP20Q9Y6A4 193 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-204ENST00000393546 PRAMEF33A0A0G2JMD5 474 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 SLC5A10A0PJK1 596 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 IQCF5A8MTL0 148 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 KPNA5O15131 536 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 S1PR4O95977 384 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ESR1P03372 595 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 AMD1P17707 334 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 CCR7P32248 378 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 MAPK9P45984 424 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 PREPP48147 710 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ADARP55265 1226 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 SLC7A5Q01650 507 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 CBLBQ13191 982 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 CTBP1Q13363 440 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 BOP1Q14137 746 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 GPR18Q14330 331 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ANKMY2Q8IV38 441 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 CEP112Q8N8E3 955 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ASZ1Q8WWH4 475 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 NCSTNQ92542 709 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ART4Q93070 314 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 ATXN7L3BQ96GX2 97 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 NUDT22Q9BRQ3 303 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 FOXP3Q9BZS1 431 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 NRSN2Q9GZP1 204 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 IARS2Q9NSE4 1012 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms