RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 KCNK5O95279 499 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PIGNO95427 931 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 MLYCDO95822 493 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GH2P01242 217 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 IGHV4-59P01825 116 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TPOP07202 933 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ACADMP11310 421 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GATA1P15976 413 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CA6P23280 308 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 HRH2P25021 359 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PSMA4P25789 261 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 EPHA8P29322 1005 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SHC1P29353 583 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 KRT9P35527 623 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 KRT2P35908 639 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CHRNA7P36544 502 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 WNT5AP41221 380 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GPR143P51810 404 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PDX1P52945 283 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GSDMDP57764 484 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SNX16P57768 344 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 RUNX1T1Q06455 604 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 UBE2V1Q13404 147 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CRYMQ14894 314 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PRICKLE4Q2TBC4 344 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PCGF3Q3KNV8 242 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SOWAHCQ53LP3 525 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TAF1BQ53T94 588 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 C2CD6Q53TS8 623 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GCNT6Q5T4J0 391 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 LYSMD4Q5XG99 296 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM109BQ6ICB4 259 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PSRC1Q6PGN9 363 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 BHLHB9Q6PI77 547 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 FIP1L1Q6UN15 594 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 GLDNQ6ZMI3 551 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 Q6ZSR9 355 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 DENND5BQ6ZUT9 1274 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC16A9Q7RTY1 509 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 R3HCC1LQ7Z5L2 792 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CDC20BQ86Y33 519 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TICAM1Q8IUC6 712 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ARHGAP12Q8IWW6 846 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 DIS3L2Q8IYB7 885 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CNTROBQ8N137 903 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SCML4Q8N228 414 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 RASGEF1CQ8N431 466 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 MARVELD2Q8N4S9 558 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 AMER3Q8N944 861 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF383Q8NA42 475 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM116Q8NCL8 245 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 C1orf131Q8NDD1 294 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 OR1J1Q8NGS3 322 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 METTL6Q8TCB7 284 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 RASL10AQ92737 203 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ZUFSPQ96AP4 578 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SENP5Q96HI0 755 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 C18orf12Q96KH6 178 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SGK494Q96LW2 274 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 KRT12Q99456 494 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PIP5K1AQ99755 562 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 EGFL8Q99944 293 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 FUCA2Q9BTY2 467 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 CDK19Q9BWU1 502 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 UPF3AQ9H1J1 476 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SEMA6AQ9H2E6 1030 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 HHATLQ9HCP6 504 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PREBQ9HCU5 417 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PCDHB16Q9NRJ7 776 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM120CQ9NX05 1096 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TRMT1Q9NXH9 659 aaKnown RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 WDR37Q9Y2I8 494 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 KCNE2Q9Y6J6 123 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 SESN1Q9Y6P5 492 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 COL5A2P05997 1499 aaPredicted RBP1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 KDM3AQ9Y4C1 1321 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 IGLV9-49A0A0B4J1Y8 123 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 OR2M5A3KFT3 312 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MYO1GB0I1T2 1018 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DNM1LO00429 736 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF197O14709 1029 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF217O75362 1048 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 NGFP01138 241 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 EIF2S1P05198 315 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SRPRAP08240 638 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 PRKAR1AP10644 381 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 VPREB1P12018 145 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 EFNA1P20827 205 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 UGT1A4P22310 534 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 TLX1P31314 330 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC6A6P31641 620 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ARL3P36405 182 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 PPARGP37231 505 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 HNF4AP41235 474 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MATR3P43243 847 aaKnown RBP eCLIP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 THOP1P52888 689 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CYCSP99999 105 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 LGALS3BPQ08380 585 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ELAVL2Q12926 359 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ENPP2Q13822 863 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms