RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CD82P27701 267 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 PBLDP30039 288 aaPredicted RBP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 CSTF2P33240 577 aaKnown RBP eCLIP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 NSG1P42857 185 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 CAPZBP47756 277 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 LMAN1P49257 510 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 UCNP55089 124 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 GFERP55789 205 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 MC2RQ01718 297 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 RPA4Q13156 261 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 KCNJ11Q14654 390 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 PCID2Q5JVF3 399 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 ARMC3Q5W041 872 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 LRRC8BQ6P9F7 803 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 TAS2R42Q7RTR8 314 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 CFAP206Q8IYR0 622 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 KLHL6Q8WZ60 621 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 RSC1A1Q92681 617 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 KIFC1Q9BW19 673 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 DDA1Q9BW61 102 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 IL22Q9GZX6 179 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 COG4Q9H9E3 785 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 CHRAC1Q9NRG0 131 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 ANKRD12Q6UB98 2062 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
IGHV4-28-201ENST00000390612 SPTA1P02549 2419 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 USP27XA6NNY8 438 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 EFCAB7A8K855 629 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 A8MU76 341 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 AP3B1O00203 1094 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 AGRPO00253 132 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 CAPN5O15484 640 aaPredicted RBP11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 LIPCP11150 499 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 AMD1P17707 334 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 PDHA2P29803 388 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 MAPK9P45984 424 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 CD151P48509 253 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 MAPK10P53779 464 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 SEMA3AQ14563 771 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 TGIF1Q15583 401 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 LYPLAL1Q5VWZ2 237 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 AFTPHQ6ULP2 937 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 CERS6Q6ZMG9 384 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 GSTA5Q7RTV2 222 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 PRSS42Q7Z5A4 293 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZFAND4Q86XD8 727 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 JAMLQ86YT9 394 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR4L1Q8NH43 312 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 ART4Q93070 314 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 C12orf66Q96MD2 445 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 NAP1L3Q99457 506 aaPredicted RBP11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 AP1M1Q9BXS5 423 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 TWSG1Q9GZX9 223 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 KIR3DX1Q9H7L2 352 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 MRM3Q9HC36 420 aaKnown RBP11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 SMARCAL1Q9NZC9 954 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 B3GALT1Q9Y5Z6 326 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 CFAP20Q9Y6A4 193 aaKnown RBP11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
IGHV4-28-201ENST00000390612 SLC5A10A0PJK1 596 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 K7ENP7 123 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 PGRMC1O00264 195 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 QSOX1O00391 747 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZNF185O15231 689 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 KIF5CO60282 957 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 OR1I1O60431 355 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 KRT14P02533 472 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 POLBP06746 335 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ARNTP27540 789 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ACADLP28330 430 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 LEPRP48357 1165 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 SESN2P58004 480 aaPredicted RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 RAB15P59190 212 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 PPP1CAP62136 330 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CRADDP78560 199 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 BASP1P80723 227 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 SNAP47Q5SQN1 464 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 BROXQ5VW32 411 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ANKRD22Q5VYY1 191 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 INO80CQ6PI98 192 aaPredicted RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CCDC137Q6PK04 289 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CAND1Q86VP6 1230 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 MCUQ8NE86 351 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 PPHLN1Q8NEY8 458 aaKnown RBP11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 CPT1BQ92523 772 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZDHHC12Q96GR4 267 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 TGM7Q96PF1 710 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ASPSCR1Q9BZE9 553 aa11.11□□□□□ -0.63
IGHV4-28-201ENST00000390612 ZNF768Q9H5H4 540 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms