RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 NTRK1P04629 796 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 SLC35G4P0C7Q5 338 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 PSMB4P28070 264 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 ADRA1AP35348 466 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 ARL4DP49703 201 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 OTUD4Q01804 1114 aaKnown RBP16.45■□□□□ 0.22
SMN2-201ENST00000380741 KLRB1Q12918 225 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 BPHLQ86WA6 291 aaPredicted RBP16.45■□□□□ 0.22
SMN2-201ENST00000380741 OOSP2Q86WS3 158 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 D2HGDHQ8N465 521 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 ACTL8Q9H568 366 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 SLC24A2Q9UI40 661 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 SPTBP11277 2137 aa16.45■□□□□ 0.22
SMN2-201ENST00000380741 OR6C74A6NCV1 312 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 C5orf60A6NFR6 353 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 MKRN2OSH3BPM6 223 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 RFPL1O75677 317 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 RECKO95980 971 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 PMS2P54278 862 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 COPS2P61201 443 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 HSD11B2P80365 405 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 XIAPP98170 497 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 MSLNQ13421 630 aaPredicted RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 SPA17Q15506 151 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 ANKRD20A2Q5SQ80 823 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 ANKRD20A1Q5TYW2 823 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 ANKRD20A3Q5VUR7 823 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 TCTN3Q6NUS6 607 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 FAM199XQ6PEV8 388 aaPredicted RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 CDKL3Q8IVW4 592 aaPredicted RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 LILRA3Q8N6C8 439 aaPredicted RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 OR13C4Q8NGS5 318 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 ZFPM2Q8WW38 1151 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 LINC00615Q96LM1 132 aaPredicted RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 RMDN2Q96LZ7 410 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 FAM118BQ9BPY3 351 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 KIR3DX1Q9H7L2 352 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 CRLS1Q9UJA2 301 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 MAN2B2Q9Y2E5 1009 aa16.44■□□□□ 0.22
SMN2-201ENST00000380741 TNRC6AQ8NDV7 1962 aaKnown RBP16.44■□□□□ 0.22
SMN2-201ENST00000380741 KLHL33A6NCF5 533 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 AGAP14A8MT82 685 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 PJA2O43164 708 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 CPNE3O75131 537 aaKnown RBP16.43■□□□□ 0.22
SMN2-201ENST00000380741 POLBP06746 335 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 ARCN1P48444 511 aaKnown RBP16.43■□□□□ 0.22
SMN2-201ENST00000380741 KPNA2P52292 529 aaKnown RBP16.43■□□□□ 0.22
SMN2-201ENST00000380741 RPS18P62269 152 aaKnown RBP16.43■□□□□ 0.22
SMN2-201ENST00000380741 TUBB4BP68371 445 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 TUBB2AQ13885 445 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 GSE1Q14687 1217 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 GPR19Q15760 415 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 CFAP206Q8IYR0 622 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 CCDC170Q8IYT3 715 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 PPM1MQ96MI6 270 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 FERMT1Q9BQL6 677 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 TUBB2BQ9BVA1 445 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 OSBPL8Q9BZF1 889 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 PLAAQ9Y263 795 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 EFR3BQ9Y2G0 817 aa16.43■□□□□ 0.22
SMN2-201ENST00000380741 AAR2Q9Y312 384 aaKnown RBP16.43■□□□□ 0.22
SMN2-201ENST00000380741 PIKFYVEQ9Y2I7 2098 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 RCCD1A6NED2 376 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 KCNN4O15554 427 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 SCRG1O75711 98 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 DNAJB5O75953 348 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 ZBTB11O95625 1053 aaPredicted RBP16.42■□□□□ 0.22
SMN2-201ENST00000380741 CRTAMO95727 393 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 RBP3P10745 1247 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 PYGMP11217 842 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 RALBP11234 206 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 CTNNA2P26232 953 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 PTPN4P29074 926 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 PRLHRP49683 370 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 ZNF140P52738 457 aaPredicted RBP16.42■□□□□ 0.22
SMN2-201ENST00000380741 EIF3EP60228 445 aaKnown RBP16.42■□□□□ 0.22
SMN2-201ENST00000380741 TMPRSS15P98073 1019 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 SRSF1Q07955 248 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMN2-201ENST00000380741 LAMB3Q13751 1172 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 PRPSAP1Q14558 356 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
SMN2-201ENST00000380741 ARMC6Q6NXE6 501 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 ASB18Q6ZVZ8 466 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 TMEM126BQ8IUX1 230 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 NXPE1Q8N323 547 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 CCDC110Q8TBZ0 833 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 HM13Q8TCT9 377 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 ULK4Q96C45 1275 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 ZNF501Q96CX3 271 aaPredicted RBP16.42■□□□□ 0.22
SMN2-201ENST00000380741 DCUN1D1Q96GG9 259 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 SPATA13Q96N96 652 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 GPR87Q9BY21 358 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 TRIM55Q9BYV6 548 aa16.42■□□□□ 0.22
SMN2-201ENST00000380741 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms