RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 OR4F21O95013 312 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 CLDN7O95471 211 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 OTCP00480 354 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 CD70P32970 193 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 ECT2LQ008S8 904 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 GRM2Q14416 872 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 FBXO48Q5FWF7 155 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 ATAT1Q5SQI0 421 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 ST13P4Q8IZP2 240 aaPredicted RBP21.2■□□□□ 0.98
TRIM54-202ENST00000380075 ATP6V1E2Q96A05 226 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 LMLNQ96KR4 655 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 UHRF1Q96T88 793 aaPredicted RBP21.2■□□□□ 0.98
TRIM54-202ENST00000380075 MUC13Q9H3R2 512 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 LATS2Q9NRM7 1088 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 INTS6Q9UL03 887 aaKnown RBP21.2■□□□□ 0.98
TRIM54-202ENST00000380075 HS3ST2Q9Y278 367 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 ST14Q9Y5Y6 855 aa21.2■□□□□ 0.98
TRIM54-202ENST00000380075 GRXCR2A6NFK2 248 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 AGAP14A8MT82 685 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 AP1G1O43747 822 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 RHOP08100 348 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ATXN3P54252 364 aaPredicted RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 NME5P56597 212 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 TTLL9Q3SXZ7 439 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ATP6AP1LQ52LC2 224 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 PITRM1Q5JRX3 1037 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 DGKKQ5KSL6 1271 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 IL23RQ5VWK5 629 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ZDHHC20Q5W0Z9 365 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 TPRG1Q6ZUI0 275 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 TTC16Q8NEE8 873 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 LRRC58Q96CX6 371 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 TRAPPC9Q96Q05 1148 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ASAH2Q9NR71 780 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 PLK2Q9NYY3 685 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 A0A1W2PQ67 120 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 AQP12BA6NM10 295 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 FXYD1O00168 92 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 NRG2O14511 850 aaPredicted RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 RNASEH2AO75792 299 aaKnown RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 SLC25A14O95258 325 aaPredicted RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 NPPAP01160 153 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 SRCP12931 536 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 DIO3P55073 304 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ERVPABLB-1P60509 514 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 GTF2H2Q13888 395 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 PDK3Q15120 406 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 GTF2H2CQ6P1K8 395 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 RNF165Q6ZSG1 346 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 USP45Q70EL2 814 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 GOLGA7Q7Z5G4 137 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 AQP12AQ8IXF9 295 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 NXPE1Q8N323 547 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ZBTB2Q8N680 514 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 CDYL2Q8N8U2 506 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ZNF557Q8N988 423 aaPredicted RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 OR2T34Q8NGX1 318 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 OR2T3Q8NH03 318 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 ECHDC3Q96DC8 303 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 CPEB1Q9BZB8 566 aaKnown RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 CEP44Q9C0F1 390 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 NOL11Q9H8H0 719 aaKnown RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 PTBP2Q9UKA9 531 aaKnown RBP21.19■□□□□ 0.98
TRIM54-202ENST00000380075 CLEC4EQ9ULY5 219 aa21.19■□□□□ 0.98
TRIM54-202ENST00000380075 A0A1W2PRU2 124 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 TXNDC9O14530 226 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 EEDO75530 441 aaKnown RBP21.18■□□□□ 0.98
TRIM54-202ENST00000380075 SLC22A3O75751 556 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 CBSLP0DN79 551 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 CBSP35520 551 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 CCR2P41597 374 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 CHRNA6Q15825 494 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 MYLK3Q32MK0 819 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 GPRC6AQ5T6X5 926 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 SLC15A3Q8IY34 581 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 SCRN2Q96FV2 425 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 BOCQ9BWV1 1114 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 TNKS2Q9H2K2 1166 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 RDH14Q9HBH5 336 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 HEBP1Q9NRV9 189 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 SUN2Q9UH99 717 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 LEF1Q9UJU2 399 aaPredicted RBP21.18■□□□□ 0.98
TRIM54-202ENST00000380075 ASB1Q9Y576 335 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 DENND4CQ5VZ89 1909 aa21.18■□□□□ 0.98
TRIM54-202ENST00000380075 NME4O00746 187 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 FGF19O95750 216 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 MSH3P20585 1137 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 DDX6P26196 483 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRIM54-202ENST00000380075 CHN2P52757 468 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SLC5A9Q2M3M2 681 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 LEXMQ3ZCV2 418 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 C6orf136Q5SQH8 315 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SULT1C3Q6IMI6 304 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 LETMD1Q6P1Q0 360 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 C22orf39Q6P5X5 142 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 OR52B6Q8NGF0 335 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 METTL6Q8TCB7 284 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 UBTD2Q8WUN7 234 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SUSD6Q92537 303 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 ESAMQ96AP7 390 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms