RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 NPIPA5E9PKD4 350 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 MTHFRP42898 656 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 SMAD3P84022 425 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ZC3HC1Q86WB0 502 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CCDC28BQ9BUN5 200 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ELOA3DA6NLF2 546 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 HSPA12AO43301 675 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CPNE3O75131 537 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 UBOX5O94941 541 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ITGAVP06756 1048 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ELOA3BQ3SY89 546 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ELOA3Q8NG57 546 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ART5Q96L15 291 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 TNFP01375 233 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FBXO15Q8NCQ5 510 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 NDNQ99608 321 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 LYARQ9NX58 379 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 AIF1P55008 147 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 POU5F1Q01860 360 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 GCNT1Q02742 428 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 TROAPQ12815 778 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 MYOCQ99972 504 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC37A4O43826 429 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF16P17020 682 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM83DQ9H4H8 585 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CPSF6Q16630 551 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 RNASE12Q5GAN4 147 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 LINGO2Q7L985 606 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CLK4Q9HAZ1 481 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 TIGARQ9NQ88 270 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 IRF2P14316 349 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ITGB3BPQ13352 177 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 C15orf40Q8WUR7 153 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ULBP1Q9BZM6 244 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FADS2O95864 444 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 MARCH7Q9H992 704 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CFAP97Q9P2B7 532 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 KCNQ2O43526 872 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 GTPBP2Q9BX10 602 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 SLC27A5Q9Y2P5 690 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 POP4O95707 220 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 PLP2Q04941 152 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 KIAA1683Q9H0B3 1180 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 CD248Q9HCU0 757 aa11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 MKKSQ9NPJ1 570 aaPredicted RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 DDX20Q9UHI6 824 aaKnown RBP11.1□□□□□ -0.63
PTCHD1-201ENST00000379361 E5RJQ4 531 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 UGT2B4P06133 528 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 BORAQ6PGQ7 559 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 AP2S1P53680 142 aaPredicted RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CCL23P55773 120 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SPATA19Q7Z5L4 167 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZMIZ2Q8NF64 920 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TAS1R2Q8TE23 839 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SETD7Q8WTS6 366 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF75CPQ92670 426 aaPredicted RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 MKL1Q969V6 931 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 GMEB2Q9UKD1 530 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CXCR1P25024 350 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 OR7D4Q8NG98 312 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CERS2Q96G23 380 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 KLRF1Q9NZS2 232 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 POLNQ7Z5Q5 900 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 HID1Q8IV36 788 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TET1Q8NFU7 2136 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 NDRG2Q9UN36 371 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CLDN11O75508 207 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 VMACQ2NL98 169 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 CERS6Q6ZMG9 384 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 SLCO6A1Q86UG4 719 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 NPAS2Q99743 824 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TRIM36Q9NQ86 728 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 MSR1P21757 451 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 IGFBP5P24593 272 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 UBXN2BQ14CS0 331 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 TMEM145Q8NBT3 493 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 PORCNQ9H237 461 aa11.09□□□□□ -0.63
PTCHD1-201ENST00000379361 ZNF226Q9NYT6 803 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms