RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 IFT20Q8IY31 132 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 GALNT15Q8N3T1 639 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 ZFPM2Q8WW38 1151 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 BIRC8Q96P09 236 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 MOCS1Q9NZB8 636 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 SCHIP1Q9P0W5 487 aaPredicted RBP12.97□□□□□ -0.33
CKAP2-202ENST00000378034 WDR37Q9Y2I8 494 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 PPM1DO15297 605 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 TCEA3O75764 348 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 VIPP01282 170 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 ADRB1P08588 477 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 FMO4P31512 558 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 SLC19A1P41440 591 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 MAGEA4P43358 317 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 MGAT5Q09328 741 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 ILF2Q12905 390 aaKnown RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CLCA4Q14CN2 919 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 TMED2Q15363 201 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 SMAD1Q15797 465 aaKnown RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 RPE65Q16518 533 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CCDC157Q569K6 752 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 DHRS13Q6UX07 377 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 TMPRSS12Q86WS5 348 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 ASZ1Q8WWH4 475 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CXorf40BQ96DE9 158 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 WWP1Q9H0M0 922 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 OR52A5Q9H2C5 316 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CCDC68Q9H2F9 335 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 PPANQ9NQ55 473 aaKnown RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 NSMCE4AQ9NXX6 385 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 ZNF624Q9P2J8 865 aaPredicted RBP12.96□□□□□ -0.33
CKAP2-202ENST00000378034 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.33
CKAP2-202ENST00000378034 IFRD1O00458 451 aaPredicted RBP12.96□□□□□ -0.34
CKAP2-202ENST00000378034 SPAG6O75602 509 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 APOA4P06727 396 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 AOAHP28039 575 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 NDUFS1P28331 727 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 CARSP49589 748 aaKnown RBP12.96□□□□□ -0.34
CKAP2-202ENST00000378034 EPHA4P54764 986 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 SYTL3Q4VX76 610 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 CTSL3PQ5NE16 218 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 TEDDM1Q5T9Z0 273 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 SPRED1Q7Z699 444 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 CCDC25Q86WR0 208 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 RELL1Q8IUW5 271 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 IFT81Q8WYA0 676 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 TMEM159Q96B96 161 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 SLC38A3Q99624 504 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 EPB41L1Q9H4G0 881 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 FBXO6Q9NRD1 293 aaPredicted RBP12.96□□□□□ -0.34
CKAP2-202ENST00000378034 LATS2Q9NRM7 1088 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 KLHL42Q9P2K6 505 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 FAM8A1Q9UBU6 413 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 PSMD13Q9UNM6 376 aa12.96□□□□□ -0.34
CKAP2-202ENST00000378034 DCHS1Q96JQ0 3298 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 NTN3O00634 580 aaPredicted RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 MTHFD1P11586 935 aaKnown RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 CCR7P32248 378 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 GPLD1P80108 840 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 INSM1Q01101 510 aaPredicted RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 SQSTM1Q13501 440 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 PLEKHS1Q5SXH7 462 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 CDCP2Q5VXM1 449 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 TMPRSS7Q7RTY8 843 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 LILRA3Q8N6C8 439 aaPredicted RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 RMDN2Q96LZ7 410 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 INSM2Q96T92 566 aaPredicted RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 FMO2Q99518 471 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 DPYSL5Q9BPU6 564 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 LRRN3Q9H3W5 708 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 CORO1CQ9ULV4 474 aaPredicted RBP12.95□□□□□ -0.34
CKAP2-202ENST00000378034 COLEC10Q9Y6Z7 277 aa12.95□□□□□ -0.34
CKAP2-202ENST00000378034 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 GPC4O75487 556 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 HAUS5O94927 633 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 MPP1Q00013 466 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 ZNF789Q5FWF6 425 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 TMEM26Q6ZUK4 368 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 OTOAQ7RTW8 1153 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 PDZD3Q86UT5 571 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 SLC26A11Q86WA9 606 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 KRT222Q8N1A0 295 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 CDKL2Q92772 493 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 KCNJ9Q92806 393 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 GRAMD1AQ96CP6 724 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms