RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CD4P01730 458 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 CYP11A1P05108 521 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 FMO4P31512 558 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 ERVK-8P63133 956 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 GTF2H3Q13889 308 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 SV2CQ496J9 727 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 CCBE1Q6UXH8 406 aaPredicted RBP15.65■□□□□ 0.1
CKAP4-201ENST00000378026 OR13C4Q8NGS5 318 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 PROX1Q92786 737 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 PYCR2Q96C36 320 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 EMILIN2Q9BXX0 1053 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 PIN4Q9Y237 131 aaKnown RBP15.65■□□□□ 0.1
CKAP4-201ENST00000378026 DERAQ9Y315 318 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 LRRC37A2A6NM11 1700 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 NPEPPSL1A6NEC2 478 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 ARVCFO00192 962 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 SSX4O60224 188 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 KATNA1O75449 491 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 RHOBTB1O94844 696 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 F9P00740 461 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 EPS8Q12929 822 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 ZFAND4Q86XD8 727 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 GALNT13Q8IUC8 556 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 DMRTB1Q96MA1 342 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF599Q96NL3 588 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 POLR3HQ9Y535 204 aaPredicted RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 MYO1GB0I1T2 1018 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 FAM20BO75063 409 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 VPS4BO75351 444 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 WISP3O95389 354 aaPredicted RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 GLP2RO95838 553 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 FDXRP22570 491 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 HTR6P50406 440 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 MRPS15P82914 257 aaKnown RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 TRAF3Q13114 568 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 IHHQ14623 411 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 AHSA2Q719I0 299 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 LRRC49Q8IUZ0 686 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 FLAD1Q8NFF5 587 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 OR52B6Q8NGF0 335 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 TSPEARQ8WU66 669 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 CLSTN3Q9BQT9 956 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 SP140LQ9H930 580 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 J3KR12 359 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 BTN3A1O00481 513 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 CD3EAPO15446 510 aaKnown RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 PAGE1O75459 146 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 DIRAS1O95057 198 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 ARPC4P59998 168 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 SLC10A7Q0GE19 358 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 PPP2R2DQ66LE6 453 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 KDELC1Q6UW63 502 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 IL27RAQ6UWB1 636 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 GCNT7Q6ZNI0 430 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 SVOPQ8N4V2 548 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 PJA1Q8NG27 643 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 CNGB3Q9NQW8 809 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 SCN3BQ9NY72 215 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 EIF2B4Q9UI10 523 aaKnown RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 TMEFF2Q9UIK5 374 aaPredicted RBP15.64■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF112Q9UJU3 913 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 UGT2A1Q9Y4X1 527 aa15.64■□□□□ 0.09
CKAP4-201ENST00000378026 DNTTP04053 509 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 CCDC159P0C7I6 412 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 ACOX1Q15067 660 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 NR6A1Q15406 480 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 SOWAHCQ53LP3 525 aaPredicted RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 LRRC8DQ7L1W4 858 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 STAG3L4Q8TBR4 150 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 FCRL2Q96LA5 508 aaPredicted RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 RDH12Q96NR8 316 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 CDK5RAP1Q96SZ6 601 aaKnown RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 RNF167Q9H6Y7 350 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 KAT8Q9H7Z6 458 aaKnown RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 UXTQ9UBK9 157 aaPredicted RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 TPRKBQ9Y3C4 175 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 LOC100506127A0A0U1RQW1 187 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 SLC7A4O43246 635 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 TSPAN3O60637 253 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 IGFBP5P24593 272 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 EPHA2P29317 976 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 GMPSP49915 693 aaPredicted RBP15.63■□□□□ 0.09
CKAP4-201ENST00000378026 CDC20Q12834 499 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 KCTD2Q14681 263 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF404Q494X3 552 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 NOTUMQ6P988 496 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 Q6ZSR9 355 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 ADHFE1Q8IWW8 467 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 ELMOD1Q8N336 334 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 CLIP3Q96DZ5 547 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 ZFP42Q96MM3 310 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 BRINP2Q9C0B6 783 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 MFSD1Q9H3U5 465 aa15.63■□□□□ 0.09
CKAP4-201ENST00000378026 MOV10Q9HCE1 1003 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms