RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CDKN2AIPNLQ96HQ2 116 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF382Q96SR6 550 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 YIPF2Q9BWQ6 316 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 ACTR8Q9H981 624 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 FBXO8Q9NRD0 319 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 ASB1Q9Y576 335 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 PCDHGB1Q9Y5G3 927 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 M0R3G1 203 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 E2F3O00716 465 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 SCNN1GP51170 649 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 PLIN5Q00G26 463 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 EMX1Q04741 257 aaPredicted RBP20.83■□□□□ 0.93
UPF3A-202ENST00000375299 ACOX1Q15067 660 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 UPP1Q16831 310 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 DGUOKQ16854 277 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 TLK2Q86UE8 772 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF548Q8NEK5 533 aaPredicted RBP20.83■□□□□ 0.93
UPF3A-202ENST00000375299 OR10T2Q8NGX3 314 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 NDNFQ8TB73 568 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 NUDT8Q8WV74 236 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 CDK15Q96Q40 435 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 SACM1LQ9NTJ5 587 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 FAM105AQ9NUU6 356 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 VAPAQ9P0L0 249 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 TSC22D4Q9Y3Q8 395 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 A0A1W2PQH9 124 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 HAS3O00219 553 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 TNFRSF10BO14763 440 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 DFNA5O60443 496 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 BMP4P12644 408 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 RPL9P32969 192 aaKnown RBP20.83■□□□□ 0.93
UPF3A-202ENST00000375299 RYKP34925 604 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 HK3P52790 923 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 ERVPABLB-1P60509 514 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 MTA1Q13330 715 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 ADPRMQ3LIE5 342 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 PAN2Q504Q3 1202 aaKnown RBP20.83■□□□□ 0.93
UPF3A-202ENST00000375299 EID3Q8N140 333 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 OR52B6Q8NGF0 335 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 OR5K1Q8NHB7 308 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 HERC2P3Q9BVR0 1158 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 POLR1EQ9GZS1 481 aaKnown RBP20.83■□□□□ 0.93
UPF3A-202ENST00000375299 NECTIN3Q9NQS3 549 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 EXD2Q9NVH0 621 aa20.83■□□□□ 0.93
UPF3A-202ENST00000375299 ANKRD28O15084 1053 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 NADKO95544 446 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-202ENST00000375299 BRCC3P46736 316 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 SERPINB10P48595 397 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 HTR6P50406 440 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 IL10RBQ08334 325 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 IL18R1Q13478 541 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 MAPRE1Q15691 268 aaKnown RBP20.82■□□□□ 0.92
UPF3A-202ENST00000375299 PLEKHG7Q6ZR37 379 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 ZCCHC7Q8N3Z6 543 aaKnown RBP20.82■□□□□ 0.92
UPF3A-202ENST00000375299 ZNF408Q9H9D4 720 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 POLR3HQ9Y535 204 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-202ENST00000375299 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 DNASE1L3Q13609 305 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 AAK1Q2M2I8 961 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 INAVAQ3KP66 663 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 MS4A13Q5J8X5 152 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 LETMD1Q6P1Q0 360 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 ABI1Q8IZP0 508 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 OR6Q1Q8NGQ2 317 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 OR10A6Q8NH74 314 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 FBLIM1Q8WUP2 373 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 RORBQ92753 470 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 GLMNQ92990 594 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 SLC39A13Q96H72 371 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 TLR6Q9Y2C9 796 aa20.82■□□□□ 0.92
UPF3A-202ENST00000375299 SLC16A6O15403 523 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 MAN1A2O60476 641 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 NDUFS3O75489 264 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 EPOP01588 193 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 CYP11A1P05108 521 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 DCTP40126 519 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 PBX3P40426 434 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 PPP1R8Q12972 351 aaKnown RBP20.81■□□□□ 0.92
UPF3A-202ENST00000375299 CDK5R2Q13319 367 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 PAGE2BQ5JRK9 111 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 IL27RAQ6UWB1 636 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 TMEM179BQ7Z7N9 219 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 ADCK1Q86TW2 530 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 ADHFE1Q8IWW8 467 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 FRS2Q8WU20 508 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 FAM162AQ96A26 154 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 TRIT1Q9H3H1 467 aaKnown RBP20.81■□□□□ 0.92
UPF3A-202ENST00000375299 NLE1Q9NVX2 485 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-202ENST00000375299 CD274Q9NZQ7 290 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 INTS6Q9UL03 887 aaKnown RBP20.81■□□□□ 0.92
UPF3A-202ENST00000375299 TTC3P53804 2025 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 LSM1O15116 133 aaKnown RBP20.81■□□□□ 0.92
UPF3A-202ENST00000375299 XPNPEP2O43895 674 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 CYP4F3Q08477 520 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 KIAA0040Q15053 153 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 NR6A1Q15406 480 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 PGS1Q32NB8 556 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 PLA2G4EQ3MJ16 856 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 GPSM1Q86YR5 675 aa20.81■□□□□ 0.92
UPF3A-202ENST00000375299 CNIH3Q8TBE1 160 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms