RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ROPN1LQ96C74 230 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ASIC4Q96FT7 647 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 HTATIP2Q9BUP3 242 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 SUV39H2Q9H5I1 410 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 RIC8BQ9NVN3 520 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TRNAU1APQ9NX07 287 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 CCDC167Q9P0B6 97 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 KLHL42Q9P2K6 505 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PPM1HQ9ULR3 514 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 NDUFAF1Q9Y375 327 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 RWDD3Q9Y3V2 267 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MTCL1Q9Y4B5 1905 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 PIP5K1BO14986 540 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MATN4O95460 622 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ACRV1P26436 265 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ETV3P41162 512 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 POLR2LP62875 67 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 PPP1R3AQ16821 1122 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 REP15Q6BDI9 236 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PRMT9Q6P2P2 845 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 C22orf39Q6P5X5 142 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 IZUMO2Q6UXV1 221 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 Q6ZNX1 250 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TMEM126BQ8IUX1 230 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 OR6K2Q8NGY2 324 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PYDC1Q8WXC3 89 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TUBGCP3Q96CW5 907 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 SCRN2Q96FV2 425 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 LMLNQ96KR4 655 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ZNF382Q96SR6 550 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 RAD9AQ99638 391 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 NPAS2Q99743 824 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 UQCC2Q9BRT2 126 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 FAM126AQ9BYI3 521 aaPredicted RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 KLHL4Q9C0H6 718 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 SEMA4BQ9NPR2 832 aaPredicted RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 C12orf4Q9NQ89 552 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TMEM45AQ9NWC5 275 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 WBP1LQ9NX94 342 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CACNA2D2Q9NY47 1150 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 GALPQ9UBC7 116 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PSMD13Q9UNM6 376 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ARPC4-TTLL3A0A0A6YYG9 625 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MRASO14807 208 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CLDN7O95471 211 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CHRNB1P11230 501 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 IFNA8P32881 189 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MRPL19P49406 292 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 UBE3AQ05086 875 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PCBP2Q15366 365 aaKnown RBP eCLIP8.09□□□□□ -1.111e-10■□□□□ 8.7
UBR4-202ENST00000375224 TGFBIQ15582 683 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CDKN3Q16667 212 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CARD16Q5EG05 197 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 DGKKQ5KSL6 1271 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 OGFOD2Q6N063 350 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MACC1Q6ZN28 852 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 GPRIN3Q6ZVF9 776 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MRPL43Q8N983 215 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 TOR1AIP2Q8NFQ8 470 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 OR7G1Q8NGA0 311 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ULK4Q96C45 1275 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 EID2BQ96D98 161 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 OTUB2Q96DC9 234 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 CIPCQ9C0C6 399 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 EHD1Q9H4M9 534 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 IL26Q9NPH9 171 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 GIN1Q9NXP7 522 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 ADA2Q9NZK5 511 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 PRKAG2Q9UGJ0 569 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 INTS6Q9UL03 887 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 PTPRSQ13332 1948 aa8.09□□□□□ -1.12
UBR4-202ENST00000375224 ZNF106Q9H2Y7 1883 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 XYLBO75191 536 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ZNF821O75541 412 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 BCAS2O75934 225 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 PRAMEF12O95522 483 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 LINC00271P0C7V0 271 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CBSLP0DN79 551 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 BPIP17213 487 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 GJA1P17302 382 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 HOXA9P31269 272 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CBSP35520 551 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 BMPR1AP36894 532 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 GSSP48637 474 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 THOP1P52888 689 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 TRAP1Q12931 704 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 COQ5Q5HYK3 327 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 METTL2BQ6P1Q9 378 aaKnown RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 ELMSAN1Q6PJG2 1045 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 VASH1Q7L8A9 365 aaPredicted RBP8.08□□□□□ -1.12
UBR4-202ENST00000375224 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 CATSPER1Q8NEC5 780 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 ECHDC3Q96DC8 303 aa8.08□□□□□ -1.12
UBR4-202ENST00000375224 HOPXQ9BPY8 73 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms