RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 OGFOD2Q6N063 350 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 PRMT9Q6P2P2 845 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 DHFR2Q86XF0 187 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CMTM8Q8IZV2 173 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ADCY4Q8NFM4 1077 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 FGF13Q92913 245 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ASIC4Q96FT7 647 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 NECTIN4Q96NY8 510 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 CDK15Q96Q40 435 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ZNF382Q96SR6 550 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
HMGCL-202ENST00000374487 MAP10Q9P2G4 905 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 PDP2Q9P2J9 529 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ZNF225Q9UK10 706 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ASB1Q9Y576 335 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 GPR45Q9Y5Y3 372 aa11.91□□□□□ -0.5
HMGCL-202ENST00000374487 ANAPC1Q9H1A4 1944 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 FFAR2O15552 330 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 XYLBO75191 536 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 GUCA1CO95843 209 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 BPIP17213 487 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 PTPN2P17706 415 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 CAPN3P20807 821 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 RPS3P23396 243 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■■■■ 45.6
HMGCL-202ENST00000374487 DGKAP23743 735 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 PAX7P23759 505 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 HOXA9P31269 272 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 SPAM1P38567 509 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 CHRNA6Q15825 494 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 ATP6AP1LQ52LC2 224 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 PITRM1Q5JRX3 1037 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 OR52E8Q6IFG1 317 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 C8orf82Q6P1X6 216 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-202ENST00000374487 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 TMC8Q8IU68 726 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 LILRA2Q8N149 483 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 OR52B6Q8NGF0 335 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 METTL6Q8TCB7 284 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 PBXIP1Q96AQ6 731 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 CCDC97Q96F63 343 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-202ENST00000374487 PLEKHG4BQ96PX9 1271 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 TUBGCP5Q96RT8 1024 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 EFHD1Q9BUP0 239 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 FAM126AQ9BYI3 521 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-202ENST00000374487 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
HMGCL-202ENST00000374487 HECAQ9UBI9 543 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-202ENST00000374487 FAM86C2PA6NEL3 165 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GAPDHSO14556 408 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 DNAJA2O60884 412 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ZNF821O75541 412 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SLC22A3O75751 556 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 RNASEH2AO75792 299 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 C8BP07358 591 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ACRV1P26436 265 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 CTSOP43234 321 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GRIK2Q13002 908 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PCBP2Q15366 365 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 TEAD2Q15562 447 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GPR33Q49SQ1 333 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PRSS36Q5K4E3 855 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ELMSAN1Q6PJG2 1045 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PARM1Q6UWI2 310 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 NPAS3Q8IXF0 933 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 FNDC5Q8NAU1 212 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GRIN3AQ8TCU5 1115 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 FGF14Q92915 247 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 EME1Q96AY2 570 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 EGFL8Q99944 293 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SLC46A2Q9BY10 475 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SUN2Q9UH99 717 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 INTS6Q9UL03 887 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 DENND4AQ7Z401 1863 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 NARSO43776 548 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 KATNA1O75449 491 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 CAPN1P07384 714 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PRR35P0CG20 571 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SRCP12931 536 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 LAMP2P13473 410 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ERVPABLB-1P60509 514 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ERVK-8P63133 956 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 SEMG2Q02383 582 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GTF2H2Q13888 395 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 CAPRIN1Q14444 709 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PDK3Q15120 406 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 CDKN3Q16667 212 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 MYLK3Q32MK0 819 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 C18orf21Q32NC0 220 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 XKR7Q5GH72 579 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GTF2H2CQ6P1K8 395 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 IL27RAQ6UWB1 636 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 USP45Q70EL2 814 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GOLGA7Q7Z5G4 137 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 TSPAN33Q86UF1 283 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms