RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 SSU72P8A0A1W2PR75 194 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 SYCE3A1L190 88 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 OR6C74A6NCV1 312 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 RNF224P0DH78 156 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 TNNT1P13805 278 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
CXCL12-202ENST00000374426 ADCY2Q08462 1091 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 PTPRCAPQ14761 206 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LLGL1Q15334 1064 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 TAZQ16635 292 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LONRF2Q1L5Z9 754 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 FAM69BQ5VUD6 431 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LCN10Q6JVE6 187 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 BZW1Q7L1Q6 419 aaKnown RBP13.44□□□□□ -0.26
CXCL12-202ENST00000374426 DET1Q7L5Y6 550 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 CARFQ8N187 725 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 IPMKQ8NFU5 416 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 OR8K5Q8NH50 307 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 ZFPM2Q8WW38 1151 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 C12orf66Q96MD2 445 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LRFN5Q96NI6 719 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 FCRL5Q96RD9 977 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 DEF6Q9H4E7 631 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LATS2Q9NRM7 1088 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
CXCL12-202ENST00000374426 BTRCQ9Y297 605 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 PKP3Q9Y446 797 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.44□□□□□ -0.26
CXCL12-202ENST00000374426 LRBAP50851 2863 aa13.44□□□□□ -0.26
CXCL12-202ENST00000374426 MEN1O00255 615 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 DDX3YO15523 660 aaKnown RBP13.43□□□□□ -0.26
CXCL12-202ENST00000374426 AKR1B10O60218 316 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 CST8O60676 142 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 SEMA7AO75326 666 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 CEACAM4O75871 244 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 HLA-DPA1P20036 260 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 MSH3P20585 1137 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 AKT1P31749 480 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 TNNT3P45378 269 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-202ENST00000374426 ABRQ12979 859 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 PRR30Q53SZ7 412 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-202ENST00000374426 ODF2Q5BJF6 829 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 PLEKHS1Q5SXH7 462 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 ENDOVQ8N8Q3 282 aaKnown RBP13.43□□□□□ -0.26
CXCL12-202ENST00000374426 OR8K1Q8NGG5 319 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 OR2L2Q8NH16 312 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 ZNF398Q8TD17 642 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 SSC4DQ8WTU2 575 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 SOHLH2Q9NX45 425 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-202ENST00000374426 FAM8A1Q9UBU6 413 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 ACSL5Q9ULC5 683 aa13.43□□□□□ -0.26
CXCL12-202ENST00000374426 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 STX7O15400 261 aaKnown RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 SGTAO43765 313 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 LCA5LO95447 670 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 PRAMEF1O95521 474 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 KLK3P07288 261 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 CAPN1P07384 714 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 RAB40ALP0C0E4 278 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 SLC35G4P0C7Q5 338 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 POLR2CP19387 275 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 RORAP35398 523 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 SLC1A1P43005 524 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 GSDMDP57764 484 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 MPP3Q13368 585 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 TFDP2Q14188 446 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 INPP5JQ15735 1006 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 ZNF789Q5FWF6 425 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 KAZNQ674X7 775 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 ARMC6Q6NXE6 501 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 JMJD6Q6NYC1 403 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 PID1Q7Z2X4 250 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 ZC3H18Q86VM9 953 aaKnown RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 DSELQ8IZU8 1212 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 LILRA3Q8N6C8 439 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-202ENST00000374426 Q8NA96 180 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 FDCSPQ8NFU4 85 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 OR4E2Q8NGC2 313 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 CPT1BQ92523 772 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 VAT1Q99536 393 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 CHP1Q99653 195 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 NLNQ9BYT8 704 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 LUZP4Q9P127 313 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 POMT2Q9UKY4 750 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 TCFL5Q9UL49 500 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 SNX7Q9UNH6 387 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 PCDHGB7Q9Y5F8 929 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms