RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 GPR18Q14330 331 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 KRT33BQ14525 404 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 SEMA3AQ14563 771 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 PLCL1Q15111 1095 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RNF187Q5TA31 235 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM71Q6P5X7 295 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 WDR74Q6RFH5 385 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RAB11FIP2Q7L804 512 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 TMPRSS9Q7Z410 1059 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 SDCCAG8Q86SQ7 713 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 LILRA3Q8N6C8 439 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 NCSTNQ92542 709 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 ELMO1Q92556 727 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 TRIM44Q96DX7 344 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 KRT12Q99456 494 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 MARCH4Q9P2E8 410 aaPredicted RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RALYQ9UKM9 306 aaKnown RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 LOXL2Q9Y4K0 774 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 HEBP2Q9Y5Z4 205 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 CFAP20Q9Y6A4 193 aaKnown RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 PRSS21Q9Y6M0 314 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 RPS6KL1Q9Y6S9 549 aa11.76□□□□□ -0.53
HDAC8-201ENST00000373554 MAP1BP46821 2468 aaKnown RBP11.76□□□□□ -0.53
HDAC8-201ENST00000373554 KNTC1P50748 2209 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 IGHV5-10-1A0A0J9YXX1 117 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 SMAPO00193 183 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 NDC80O14777 642 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 THRAP10827 490 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 AMD1P17707 334 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 ARNTP27540 789 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 NDUFS1P28331 727 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 CAPZBP47756 277 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 BOP1Q14137 746 aaKnown RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 MORF4L2Q15014 288 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 TBC1D25Q3MII6 688 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 KLHL35Q6PF15 583 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 IGF2-ASQ6U949 168 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 XKR5Q6UX68 686 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 LDB1Q86U70 411 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 LRRC6Q86X45 466 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 FBXO39Q8N4B4 442 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 SPATA4Q8NEY3 305 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 GPR150Q8NGU9 434 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 STAMBPL1Q96FJ0 436 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 SNF8Q96H20 258 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 RMDN2Q96LZ7 410 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
HDAC8-201ENST00000373554 TRIM51Q9BSJ1 452 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 GNPTGQ9UJJ9 305 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 COLEC10Q9Y6Z7 277 aa11.75□□□□□ -0.53
HDAC8-201ENST00000373554 PRAMEF33A0A0G2JMD5 474 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 A0A1W2PNU3 283 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 UBA6A0AVT1 1052 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 GOLGA8KD6RF30 607 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 GOLGA8TH3BQL2 631 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 USP1O94782 785 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TNFSF15O95150 251 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ITGA2BP08514 1039 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TYRP1P17643 537 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PGAM1P18669 254 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 OGNP20774 298 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 MPSTP25325 297 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PREPP48147 710 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 CD151P48509 253 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ERVPABLB-1P60509 514 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PLOD1Q02809 727 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 CFHR1Q03591 330 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 C16orf72Q14CZ0 275 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TMED2Q15363 201 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TYSND1Q2T9J0 566 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF658BQ4V348 819 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 SNAP47Q5SQN1 464 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF470Q6ECI4 717 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PTRHD1Q6GMV3 140 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
HDAC8-201ENST00000373554 MAATS1Q7Z4T9 603 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 TMEM135Q86UB9 458 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PDZD3Q86UT5 571 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 AGBL5Q8NDL9 886 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 RCBTB1Q8NDN9 531 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ZFPM2Q8WW38 1151 aa11.74□□□□□ -0.53
HDAC8-201ENST00000373554 ZNF578Q96N58 590 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms