RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 KCTD5Q9NXV2 234 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 C1SP09871 688 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 PIRTP0C851 137 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 STC1P52823 247 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 OLIG2Q13516 323 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 BMPR2Q13873 1038 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 IRF4Q15306 451 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 TECPR1Q7Z6L1 1165 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 RAVER1Q8IY67 606 aaKnown RBP20.21■□□□□ 0.83
SYNC-201ENST00000373484 DTD2Q96FN9 168 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 CLPTM1LQ96KA5 538 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 RXFP3Q9NSD7 469 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 DNAJC16Q9Y2G8 782 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 MAD1L1Q9Y6D9 718 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 DNAH14Q0VDD8 3507 aa20.21■□□□□ 0.83
SYNC-201ENST00000373484 TLR4O00206 839 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 AP2A1O95782 977 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ETV3P41162 512 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 C21orf59P57076 290 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 PDE1BQ01064 536 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 UBAP2LQ14157 1087 aaKnown RBP20.2■□□□□ 0.82
SYNC-201ENST00000373484 KIF19Q2TAC6 998 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 AASDHQ4L235 1098 aaPredicted RBP20.2■□□□□ 0.82
SYNC-201ENST00000373484 MROH9Q5TGP6 573 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 LYSMD3Q7Z3D4 306 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 KIAA2013Q8IYS2 634 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 NUS1Q96E22 293 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 KLHDC7BQ96G42 594 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 TBL1YQ9BQ87 522 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 LRRC40Q9H9A6 602 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ZNF711Q9Y462 761 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 SPO11Q9Y5K1 396 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ZNF106Q9H2Y7 1883 aaKnown RBP20.2■□□□□ 0.82
SYNC-201ENST00000373484 SLC22A2O15244 555 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 PSMD3O43242 534 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 THEGLP0DJG4 465 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 CTSKP43235 329 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 HK2P52789 917 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 LSAMPQ13449 338 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 FRG1Q14331 258 aaKnown RBP20.2■□□□□ 0.82
SYNC-201ENST00000373484 Q6ZVL8 140 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ALDH16A1Q8IZ83 802 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 OR13H1Q8NG92 308 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ISL2Q96A47 359 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 EID2BQ96D98 161 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 APOL2Q9BQE5 337 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 EBF4Q9BQW3 602 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 EDEM2Q9BV94 578 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ZFYVE1Q9HBF4 777 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 ARNT2Q9HBZ2 717 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 GPR27Q9NS67 375 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 C6orf203Q9P0P8 240 aaPredicted RBP20.2■□□□□ 0.82
SYNC-201ENST00000373484 EMCNQ9ULC0 261 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 SNX11Q9Y5W9 270 aa20.2■□□□□ 0.82
SYNC-201ENST00000373484 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 ERI2A8K979 691 aaKnown RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 UGT1A9O60656 530 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 USP12O75317 370 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 H2AFYO75367 372 aaKnown RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 KITP10721 976 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 IDH3AP50213 366 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 NXPH1P58417 271 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 PFN3P60673 137 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 CCNIQ14094 377 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 CCDC153Q494R4 210 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 DENND5AQ6IQ26 1287 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 ESRP1Q6NXG1 681 aaKnown RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 TRMT10BQ6PF06 316 aaKnown RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 IL27RAQ6UWB1 636 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 PTAR1Q7Z6K3 402 aaPredicted RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 ZNF778Q96MU6 729 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 UGT1A7Q9HAW7 530 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 UGT1A10Q9HAW8 530 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 UGT1A8Q9HAW9 530 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 MARCOQ9UEW3 520 aaPredicted RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 PRPF19Q9UMS4 504 aaKnown RBP20.19■□□□□ 0.82
SYNC-201ENST00000373484 DMXL1Q9Y485 3027 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 CFAP54Q96N23 3096 aa20.19■□□□□ 0.82
SYNC-201ENST00000373484 TDRD6O60522 2096 aaKnown RBP20.18■□□□□ 0.82
SYNC-201ENST00000373484 LRP4O75096 1905 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 VCLP18206 1134 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 RABIFP47224 123 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 ANKRD20A4Q4UJ75 823 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 LRRC8BQ6P9F7 803 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 Q6ZSR6 202 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 RFLNAQ6ZTI6 216 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 RAPH1Q70E73 1250 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 SLC22A18ASQ8N1D0 253 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 PLA2G15Q8NCC3 412 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 RTKNQ9BST9 563 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 ZNF395Q9H8N7 513 aaPredicted RBP20.18■□□□□ 0.82
SYNC-201ENST00000373484 HACD3Q9P035 362 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 BCAP29Q9UHQ4 241 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 TOR1BO14657 336 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 GDF9O60383 454 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 PROCP04070 461 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 PCCBP05166 539 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 PGAM1P18669 254 aa20.18■□□□□ 0.82
SYNC-201ENST00000373484 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
SYNC-201ENST00000373484 SPINT3P49223 89 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms