RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PDCD4Q53EL6 469 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 FITM2Q8N6M3 262 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 NPAS2Q99743 824 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 NMUR2Q9GZQ4 415 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 BTRCQ9Y297 605 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 AKT2P31751 481 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CD79BP40259 229 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 IL10RBQ08334 325 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CEP97Q8IW35 865 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRMT61BQ9BVS5 477 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 MINDY3Q9H8M7 445 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SNX10Q9Y5X0 201 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SMIM15Q7Z3B0 74 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 GPR135Q8IZ08 494 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 STYXQ8WUJ0 223 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SHDQ96IW2 340 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 LURAP1Q96LR2 239 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 ADI1Q9BV57 179 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TOR4AQ9NXH8 423 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 MRPS7Q9Y2R9 242 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 INPPL1O15357 1258 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC11A1P49279 550 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR8H1Q8NGG4 311 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SSR3Q9UNL2 185 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 POLR3HQ9Y535 204 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 C2CD4BA6NLJ0 364 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 YJEFN3A6XGL0 299 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 UGT2B11O75310 529 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 TPSB2P20231 275 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PRDX6P30041 224 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC38A2Q96QD8 506 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC25A51Q9H1U9 297 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 NOL11Q9H8H0 719 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 QPCTLQ9NXS2 382 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 GNEQ9Y223 722 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PCDHGA10Q9Y5H3 936 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 NELFEP18615 380 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 FNBP1LQ5T0N5 605 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CAPN13Q6MZZ7 669 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 MUC13Q9H3R2 512 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 LGALS13Q9UHV8 139 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 NRP2O60462 931 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SNAPC5O75971 98 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 FAM163BP0C2L3 166 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 GBE1Q04446 702 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 GPR156Q8NFN8 814 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 TLCD1Q96CP7 247 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CRISPLD1Q9H336 500 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 CMTM6Q9NX76 183 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SAMHD1Q9Y3Z3 626 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR10H1Q9Y4A9 318 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 ITGA3P26006 1051 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 COPZ1P61923 177 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 RPL38P63173 70 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 DEFA5Q01523 94 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 ILF3Q12906 894 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC1A5Q15758 541 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 EGFLAMQ63HQ2 1017 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 C17orf64Q86WR6 236 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 HPS6Q86YV9 775 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 ITCHQ96J02 903 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 BTBD9Q96Q07 612 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 S100A13Q99584 98 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZNF232Q9UNY5 417 aa13.16□□□□□ -0.3
RAPGEF1-201ENST00000372189 PRMT5O14744 637 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 FPGTO14772 594 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms