RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 S1PR4O95977 384 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 TUBB4AP04350 444 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 CAPNS1P04632 268 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 VCLP18206 1134 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 PGAM1P18669 254 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 CCR7P32248 378 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 CSF2RBP32927 897 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 GPR3P46089 330 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 TTPAP49638 278 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 CTBP1Q13363 440 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 BRD3Q15059 726 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 ISXQ2M1V0 245 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 AMZ1Q400G9 498 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 UNC5AQ6ZN44 842 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 SLC9B2Q86UD5 537 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 VRK3Q8IV63 474 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 KDF1Q8NAX2 398 aaPredicted RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 ART4Q93070 314 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNCG-202ENST00000372017 NUDT22Q9BRQ3 303 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 SLC40A1Q9NP59 571 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 FBXO6Q9NRD1 293 aaPredicted RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 C20orf96Q9NUD7 363 aaPredicted RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 WHRNQ9P202 907 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 SLC17A6Q9P2U8 582 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
SNCG-202ENST00000372017 CDYLQ9Y232 598 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 CRYL1Q9Y2S2 319 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 LAMA5O15230 3695 aa12.31□□□□□ -0.44
SNCG-202ENST00000372017 UBA6A0AVT1 1052 aaPredicted RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 TMEM8BA6NDV4 472 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 TRABD2BA6NFA1 517 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 OR56A5P0C7T3 313 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 ERVK-10P10266 1014 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 OGNP20774 298 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 RPS3P23396 243 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNCG-202ENST00000372017 GABRB3P28472 473 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 FMO4P31512 558 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 CSE1LP55060 971 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 MPP1Q00013 466 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 SPIDRQ14159 915 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 GPR18Q14330 331 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 HIF1AQ16665 826 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 LONRF1Q17RB8 773 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 AARS2Q5JTZ9 985 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 STEAP4Q687X5 459 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 ZNF549Q6P9A3 640 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 TMEM26Q6ZUK4 368 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNCG-202ENST00000372017 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 SEC14L1Q92503 715 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 ELMO1Q92556 727 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 CFAP36Q96G28 342 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 ATXN7L3BQ96GX2 97 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 C12orf66Q96MD2 445 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 GFM1Q96RP9 751 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 SLC38A3Q99624 504 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 IARS2Q9NSE4 1012 aaKnown RBP12.3□□□□□ -0.44
SNCG-202ENST00000372017 KCNK4Q9NYG8 393 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 ACSL5Q9ULC5 683 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 MED16Q9Y2X0 877 aa12.3□□□□□ -0.44
SNCG-202ENST00000372017 SMAPO00193 183 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 AGRPO00253 132 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 NIPSNAP2O75323 286 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 GPC4O75487 556 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 NDUFS3O75489 264 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 TCEA3O75764 348 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 HAUS5O94927 633 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 VIPP01282 170 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 MTHFD1P11586 935 aaKnown RBP12.29□□□□□ -0.44
SNCG-202ENST00000372017 SLC2A4P14672 509 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 PAMP19021 973 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 MPSTP25325 297 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 ACADLP28330 430 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 SLC1A2P43004 574 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 PLTPP55058 493 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
SNCG-202ENST00000372017 ARL4CP56559 192 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
SNCG-202ENST00000372017 SQSTM1Q13501 440 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 BOP1Q14137 746 aaKnown RBP12.29□□□□□ -0.44
SNCG-202ENST00000372017 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
SNCG-202ENST00000372017 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 ZNF470Q6ECI4 717 aa12.29□□□□□ -0.44
SNCG-202ENST00000372017 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms